PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0012s0820.10.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 484aa MW: 53960 Da PI: 5.7964

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0012s0820.10.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	434.5	1.5e-133	201	418	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaat 85 pppsaflgpkcalwdc+rpaqg ew+qdycssfh +lalneg+pg++pvlrp+gi+lkdgllfaalsak++ k+vgipecegaat SapurV1A.0012s0820.10.p 201 PPPSAFLGPKCALWDCPRPAQGgLEWCQDYCSSFHHSLALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAEEKDVGIPECEGAAT 286 89****************9648********************************************************** PP VOZ 86 akspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlye 171 akspwna+elfdl +legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlye SapurV1A.0012s0820.10.p 287 AKSPWNAPELFDLFVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYE 372 ********************************************************************************** PP VOZ 172 yeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 yei+++da+alyrlelk vd+kksakgk++++s+adlqk++grlta SapurV1A.0012s0820.10.p 373 YEISKCDACALYRLELKAVDGKKSAKGKIANESVADLQKQMGRLTA 418 ******************************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence Send to blast
MIFKGCSWIC SLLGKKVARL MWLSSKSKFI RCFVNGNPSS MSPLQHLLCN KLGLKFLSHF 60 EYMYIPTYHG GSLGSFSTDI CRLLQLCEEE DDATSALAAP KLEPNDQSMQ AGDKVVFQEA 120 YAVNHGQQEH AFPFVDQCKD SPTGVRSLAI SNIEGAAQLD YHQFDLPQTF EQNFYTDFNG 180 TDLGEEDGMP HVSSYLPSMC PPPSAFLGPK CALWDCPRPA QGGLEWCQDY CSSFHHSLAL 240 NEGPPGMSPV LRPGGIGLKD GLLFAALSAK AEEKDVGIPE CEGAATAKSP WNAPELFDLF 300 VLEGETIREW LFFDKPRRAF ESGNRKQRSL PDYTGRGWHE SRKQVMNEFG GLKRSYYMDP 360 QPLNNFEWHL YEYEISKCDA CALYRLELKA VDGKKSAKGK IANESVADLQ KQMGRLTAEF 420 PSDNKRAVKG RTKVNAKVGV GNVYSGSTQV APPNEAYDYG PAPHYDYLVE NLEDYYLTEF 480 KKP*

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence Send to blast

MIFKGCSWIC SLLGKKVARL MWLSSKSKFI RCFVNGNPSS MSPLQHLLCN KLGLKFLSHF  60
EYMYIPTYHG GSLGSFSTDI CRLLQLCEEE DDATSALAAP KLEPNDQSMQ AGDKVVFQEA  120
YAVNHGQQEH AFPFVDQCKD SPTGVRSLAI SNIEGAAQLD YHQFDLPQTF EQNFYTDFNG  180
TDLGEEDGMP HVSSYLPSMC PPPSAFLGPK CALWDCPRPA QGGLEWCQDY CSSFHHSLAL  240
NEGPPGMSPV LRPGGIGLKD GLLFAALSAK AEEKDVGIPE CEGAATAKSP WNAPELFDLF  300
VLEGETIREW LFFDKPRRAF ESGNRKQRSL PDYTGRGWHE SRKQVMNEFG GLKRSYYMDP  360
QPLNNFEWHL YEYEISKCDA CALYRLELKA VDGKKSAKGK IANESVADLQ KQMGRLTAEF  420
PSDNKRAVKG RTKVNAKVGV GNVYSGSTQV APPNEAYDYG PAPHYDYLVE NLEDYYLTEF  480
KKP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0012s0820.10.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024455712.1	0.0	transcription factor VOZ1 isoform X2
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9H2N9	0.0	B9H2N9_POPTR; Uncharacterized protein
STRING	POPTR_0004s05030.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0012s0820.10.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]