PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0013s0770.9.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 216aa MW: 23445.3 Da PI: 9.2695

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0013s0770.9.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.7	9.7e-22	102	164	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L +eN+aLk+e+++ +++++kl+ e+ SapurV1A.0013s0770.9.p 102 ERELKRERRKQSNRESARRSRLRKQAEAEELACKVETLNTENMALKSEIDQFTEKSQKLRLEN 164 89*********************************************************9887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16596	1.2E-16	3	83	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.6E-17	96	161	No hit	No description
Pfam	PF00170	4.5E-20	102	164	IPR004827	Basic-leucine zipper domain
SMART	SM00338	1.3E-20	102	166	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.691	104	167	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.81E-11	105	161	No hit	No description
CDD	cd14702	3.81E-16	107	156	No hit	No description
PROSITE pattern	PS00036	0	109	124	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005829	Cellular Component	cytosol
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MCSMETEGSS DGSDGNTARG KKRSREGTPT VGGDKKIETN RGPLLGEVNP STDKVLGAVV 60 DPGMTTALEL RNPSSVNVAK TNPATIPQPG VLLPSEGWVQ NERELKRERR KQSNRESARR 120 SRLRKQAEAE ELACKVETLN TENMALKSEI DQFTEKSQKL RLENAALMEK LKNARLGPTQ 180 EMVLNNIDEQ RNSNSGAKLH QLLDASPRAD AVAAG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	124	RRSRLRK
2	118	125	RRSRLRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Trans-activator of a beta-glucuronidase (GUS) reporter gene. Binds to a G-box-related element, (5'-GCAACGTGGC-3'). Also binds to the HEX-motif of wheat histone H3 promoter.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00318	DAP	Transfer from AT2G46270	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0013s0770.9.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011037554.1	1e-134	PREDICTED: G-box-binding factor 3-like isoform X2
Swissprot	Q99142	2e-56	TAF1_TOBAC; Transcriptional activator TAF-1 (Fragment)
TrEMBL	A0A3N7FZK4	1e-131	A0A3N7FZK4_POPTR; Uncharacterized protein
STRING	POPTR_0014s08990.1	1e-128	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	6e-52	G-box binding factor 3

Link Out ? help Back to Top
Phytozome	SapurV1A.0013s0770.9.p

Publications ? help Back to Top
Oeda K,Salinas J,Chua NH A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes. EMBO J., 1991. 10(7): p. 1793-802 [PMID:2050116]