PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0013s1020.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 135aa    MW: 14769.7 Da    PI: 10.0733
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0013s1020.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY41.13.6e-13110133124
                             ---SS-EEEEEEE--TT-SS-EEE CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsY 24 
                             ldDgy+WrKYGqK vk+s++prsY
  SapurV1A.0013s1020.2.p 110 LDDGYRWRKYGQKAVKNSKYPRSY 133
                             59********************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-1496133IPR003657WRKY domain
SuperFamilySSF1182907.06E-11103133IPR003657WRKY domain
PROSITE profilePS5081114.573105134IPR003657WRKY domain
SMARTSM007740.0018110134IPR003657WRKY domain
PfamPF031066.8E-9111133IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MEGQGAPPPP PPPLPQFPSQ NSPYLFTPSL LLSSSLHPSI IEPQGLPDID WVGLLSGQSG  60
LGQNRPIMDN ASMVAENGAE EEKGKKKGGR MKKATRPRFA FQTRSADDIL DDGYRWRKYG  120
QKAVKNSKYP RSYT*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00539DAPTransfer from AT5G41570Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0013s1020.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3774392e-66GQ377439.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 19 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002320160.29e-70probable WRKY transcription factor 43
TrEMBLB9I8Q52e-68B9I8Q5_POPTR; Uncharacterized protein
STRINGXP_002511926.12e-55(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.11e-17WRKY DNA-binding protein 75