PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0014s0300.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 310aa    MW: 35326.2 Da    PI: 5.3898
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0014s0300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.66.1e-2081391128
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWka 85 
                             l+pG rF P deelv++yL +kv++  +++++ ++++diy ++P ++  + ++ + ++++fF++ +kk+ t++ +++ a   ++W+ 
  SapurV1A.0014s0300.1.p   8 LMPGDRFCPYDEELVQYYLYPKVTNPLFTTSTPVRDCDIYAYQPLQIWnAFHRIHGEDVFFFTNLKKKSLTSNVTRQiADGPATWRR 94 
                             579************************999889**************734555588899******9999998877774555778**9 PP

                     NAM  86 tgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +d++  ++   + +++ ++k++ +   r+p+ + + W+m ey+l
  SapurV1A.0014s0300.1.p  95 EDSDEDFPVTidnHFSVTATRKSFSYK-SREPDHHDCCWTMYEYNL 139
                             999887666544455668999999986.899999**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-195154IPR003441NAC domain
PROSITE profilePS5100524.538154IPR003441NAC domain
PfamPF023652.0E-1310139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MEFSSLTLMP GDRFCPYDEE LVQYYLYPKV TNPLFTTSTP VRDCDIYAYQ PLQIWNAFHR  60
IHGEDVFFFT NLKKKSLTSN VTRQIADGPA TWRREDSDED FPVTIDNHFS VTATRKSFSY  120
KSREPDHHDC CWTMYEYNLP SLSEVTVLCQ LRRKGNSKSH PQKTRKRKGD GKSRPKQRRH  180
AGGVDDATNT TSQKARVGDH QGYDQQQITA PAESTESGIL YNGVRFDNLE SFSHAFLQDF  240
DNDQMAAASI KQEDYCREIL GLLHGSDLAD GVLSIQTTPE ADANPSCLVQ ENEVEMICNS  300
LPMEYPYGW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151167RRKGNSKSHPQKTRKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0014s0300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002305976.21e-124NAC domain-containing protein 101
TrEMBLA0A2K2ASW31e-124A0A2K2ASW3_POPTR; Uncharacterized protein
STRINGPOPTR_0004s10700.11e-125(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13633523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.13e-13NAC-domain protein 101