PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0018s0520.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family G2-like
Protein Properties Length: 229aa    MW: 24697.1 Da    PI: 5.2749
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0018s0520.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.58.2e-10173197125
                 G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                             k+r+rWt  LHe+Fve+v++LGG+ 
  SapurV1A.0018s0520.1.p 173 KKRIRWTRGLHEKFVECVNSLGGIA 197
                             78*********************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-7171201IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MGGVSPWQDP EPATSTDITP SQFDQLAAAF CTSECLLDFQ LDDDYEIATF PSSSQVPVPN  60
DAKMASCQSS RGNIFDESSW QTSLGPYLYS NQHHKYCGKI QKYLSTIDSG GSTSLSLERV  120
QVLGDNATLI GGQLQPPSDR QNDPELESST RHLGDGYSTC SGSGSSGPIF SSKKRIRWTR  180
GLHEKFVECV NSLGGIASKS KTKGHTEDDG NKRVDHHTGQ KSLAEISI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0018s0520.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024443216.11e-111uncharacterized protein LOC18109673 isoform X4
TrEMBLA0A2K1XAS11e-113A0A2K1XAS1_POPTR; Uncharacterized protein
STRINGPOPTR_0453s00230.16e-96(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4036022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.17e-08G2-like family protein