PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0027s0090.5.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 393aa    MW: 42818.3 Da    PI: 6.6794
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0027s0090.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.70.00049351374629
                             HHHHHHHHHHHHHHHHHHHCTSCC CS
                     HLH   6 nerErrRRdriNsafeeLrellPk 29 
                             +++Er RR ri +++ +L+el P 
  SapurV1A.0027s0090.5.p 351 SIAERVRRTRISERMRKLQELFPD 374
                             689******************996 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MSLLYSSGFK SSDGELRKNQ EFMDLNPYHY HQQQQQTQQN SSLMRYRSAP SSFLEILGNG  60
TSGHDGGGGG IGSGDYRYLR SSSPEMDTML ARFMSSCNGS GDSSSQNLQE FGERPAIKQE  120
GEDSEMVYQS LPGHNLVTDN SVSAGNSMDS AFNVMRSMAL ENSMQATKMS TANGSNLARQ  180
NSSPAGLFSD LGVDNGFVVM REGGSFRAGS GTNGEASPAS KLRSHVNFSS GQRILPHFAE  240
IGEECIGGSS PEGNVNEARC MSRFTSDYWD DASLSGLKRK RDNDGSMFSG LNTLDNQDGN  300
SGNRVTGLTH HLSLPKTVSE MATIDKFLDF QGNSVPCKIR AKRGFATHPR SIAERVRRTR  360
ISERMRKLQE LFPDMDKVVL TLDMSFSHGN SY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0027s0090.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002314023.10.0transcription factor bHLH130 isoform X2
RefseqXP_024463709.10.0transcription factor bHLH130 isoform X2
TrEMBLB9HNL60.0B9HNL6_POPTR; Uncharacterized protein
STRINGPOPTR_0009s06910.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-48bHLH family protein