PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0029s0220.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 332aa    MW: 35475.6 Da    PI: 8.2878
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0029s0220.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822219.19.9e-6821471150
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                             ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sas
  SapurV1A.0029s0220.1.p   2 TSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPVERMDIMGGSAS 88 
                             5899*********************************************************************************** PP

                  DUF822  88 aspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150
                             asp+ss+q        +sp+ sy++sp+sssfpsp+s+  + +a+     +sl+p+l++ls+ sss+
  SapurV1A.0029s0220.1.p  89 ASPCSSYQ--------PSPCVSYNPSPASSSFPSPVSSHYVANANGnadaNSLIPWLKNLSSGSSSA 147
                             ********........*********************99888776678889*********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.0E-693141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY RKGCKPVERM DIMGGSASAS PCSSYQPSPC VSYNPSPASS SFPSPVSSHY  120
VANANGNADA NSLIPWLKNL SSGSSSASPT HPHHLFIHTG SISAPVTPPL SSPTARTPRA  180
KNDWDDPAAG QSWMGQNYSF LPSSMPSSTP PSPGRQVLPH SGWLAGIQIP QSGPSSPTFS  240
LVSRHPFGFR EEALSGAGSR MWTPGQSGTC SPAIPAGIDQ TADVPMSDSM AAEFAFGSNA  300
AGLVKPWEGE RIHEECVSDD LVLTLGNSNT R*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0029s0220.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU8236050.0EU823605.1 Populus tremula isolate swl195-43 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236070.0EU823607.1 Populus tremula isolate swl195-54 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236090.0EU823609.1 Populus tremula isolate swl195-63 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236130.0EU823613.1 Populus tremula isolate swl195-76 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236190.0EU823619.1 Populus tremula isolate swl195-95 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236220.0EU823622.1 Populus tremula isolate swl195-114 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236230.0EU823623.1 Populus tremula isolate swl195-114 brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236260.0EU823626.1 Populus tremula isolate swl195-32E brassinosteroid signaling positive regulator-related protein gene, partial cds.
GenBankEU8236270.0EU823627.1 Populus tremula isolate swl195-32E brassinosteroid signaling positive regulator-related protein gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011010915.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_011010916.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
RefseqXP_011033513.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
RefseqXP_011033514.10.0PREDICTED: BES1/BZR1 homolog protein 4-like isoform X2
SwissprotQ9ZV881e-137BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLB9H2D70.0B9H2D7_POPTR; Uncharacterized protein
STRINGPOPTR_0004s06100.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-121BES1/BZR1 homolog 4