PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0032s0720.11.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 460aa MW: 51058.2 Da PI: 5.123

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0032s0720.11.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	429	7.2e-132	177	393	2	217
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaata 86 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaata SapurV1A.0032s0720.11.p 177 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATA 262 7****************9648*********************************************************** PP VOZ 87 kspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyey 172 kspwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyey SapurV1A.0032s0720.11.p 263 KSPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEY 348 ********************************************************************************** PP VOZ 173 eineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ein++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.11.p 349 EINNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 393 *****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
MVDVAVLEEQ VHQMLREWKA ELNEPSPASS LQQVIIEYHI PFIVHGGSLG SFSTDICRLL 60 QLCEEEDDAT SALAAPKLEP NDQRLQVGNN VVFQEGYGVN HGQQEHVFPF VDQCKASPSG 120 DRSMVINSVE GVAQLEYHDF DLPQNSEQNF YTGFNGMDLG EDATHLVSSY LPSMFLPPSA 180 FLGPKCALWD CSRPAQGGLD WFQDYCSSFH HAVALNEGPP GLSPILRPGG IGLKDGLLFS 240 SLSAKVEGKD VGIPECEGAA TAKSPWNAPE LFDLSVLKGE TIREWLFFDK PRRAFESGNR 300 KQRSLPDYTG RGWHESRKQV MNEFGGLKRS YYMDPQPLNN FEWHLYEYEI NNCDACALYR 360 LELKAVDGKK SAKGKVANES VADLQKQMGR LTAEFPAEHK RAVKGRTKVN SKASVGNVYS 420 GSTRVAPPTN EAYDNGSGPH YDYLTENLGD YYLTQFKKP*

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

MVDVAVLEEQ VHQMLREWKA ELNEPSPASS LQQVIIEYHI PFIVHGGSLG SFSTDICRLL  60
QLCEEEDDAT SALAAPKLEP NDQRLQVGNN VVFQEGYGVN HGQQEHVFPF VDQCKASPSG  120
DRSMVINSVE GVAQLEYHDF DLPQNSEQNF YTGFNGMDLG EDATHLVSSY LPSMFLPPSA  180
FLGPKCALWD CSRPAQGGLD WFQDYCSSFH HAVALNEGPP GLSPILRPGG IGLKDGLLFS  240
SLSAKVEGKD VGIPECEGAA TAKSPWNAPE LFDLSVLKGE TIREWLFFDK PRRAFESGNR  300
KQRSLPDYTG RGWHESRKQV MNEFGGLKRS YYMDPQPLNN FEWHLYEYEI NNCDACALYR  360
LELKAVDGKK SAKGKVANES VADLQKQMGR LTAEFPAEHK RAVKGRTKVN SKASVGNVYS  420
GSTRVAPPTN EAYDNGSGPH YDYLTENLGD YYLTQFKKP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0032s0720.11.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006377435.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024437335.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9N9L2	0.0	B9N9L2_POPTR; Uncharacterized protein
STRING	POPTR_0011s05890.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0032s0720.11.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]