PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0032s0720.12.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 448aa MW: 49596.4 Da PI: 5.0333

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0032s0720.12.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	429	6.7e-132	165	381	2	217
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaata 86 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaata SapurV1A.0032s0720.12.p 165 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATA 250 7****************9648*********************************************************** PP VOZ 87 kspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyey 172 kspwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyey SapurV1A.0032s0720.12.p 251 KSPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEY 336 ********************************************************************************** PP VOZ 173 eineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ein++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.12.p 337 EINNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 381 *****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence Send to blast
MVDVAVLEEQ VHQMLREWKA ELNEPSPASS LQQGGSLGSF STDICRLLQL CEEEDDATSA 60 LAAPKLEPND QRLQVGNNVV FQEGYGVNHG QQEHVFPFVD QCKASPSGDR SMVINSVEGV 120 AQLEYHDFDL PQNSEQNFYT GFNGMDLGED ATHLVSSYLP SMFLPPSAFL GPKCALWDCS 180 RPAQGGLDWF QDYCSSFHHA VALNEGPPGL SPILRPGGIG LKDGLLFSSL SAKVEGKDVG 240 IPECEGAATA KSPWNAPELF DLSVLKGETI REWLFFDKPR RAFESGNRKQ RSLPDYTGRG 300 WHESRKQVMN EFGGLKRSYY MDPQPLNNFE WHLYEYEINN CDACALYRLE LKAVDGKKSA 360 KGKVANESVA DLQKQMGRLT AEFPAEHKRA VKGRTKVNSK ASVGNVYSGS TRVAPPTNEA 420 YDNGSGPHYD YLTENLGDYY LTQFKKP*

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence Send to blast

MVDVAVLEEQ VHQMLREWKA ELNEPSPASS LQQGGSLGSF STDICRLLQL CEEEDDATSA  60
LAAPKLEPND QRLQVGNNVV FQEGYGVNHG QQEHVFPFVD QCKASPSGDR SMVINSVEGV  120
AQLEYHDFDL PQNSEQNFYT GFNGMDLGED ATHLVSSYLP SMFLPPSAFL GPKCALWDCS  180
RPAQGGLDWF QDYCSSFHHA VALNEGPPGL SPILRPGGIG LKDGLLFSSL SAKVEGKDVG  240
IPECEGAATA KSPWNAPELF DLSVLKGETI REWLFFDKPR RAFESGNRKQ RSLPDYTGRG  300
WHESRKQVMN EFGGLKRSYY MDPQPLNNFE WHLYEYEINN CDACALYRLE LKAVDGKKSA  360
KGKVANESVA DLQKQMGRLT AEFPAEHKRA VKGRTKVNSK ASVGNVYSGS TRVAPPTNEA  420
YDNGSGPHYD YLTENLGDYY LTQFKKP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0032s0720.12.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006377435.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024437335.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9N9L2	0.0	B9N9L2_POPTR; Uncharacterized protein
STRING	POPTR_0011s05890.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0032s0720.12.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]