PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0032s0720.16.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 337aa MW: 37430 Da PI: 6.3162

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0032s0720.16.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	430.1	3.1e-132	54	270	2	217
VOZ 2 ppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaata 86 ppsaflgpkcalwdc+rpaqg +w+qdycssfh ++alneg+pg++p+lrp+gi+lkdgllf++lsakv+gk+vgipecegaata SapurV1A.0032s0720.16.p 54 PPSAFLGPKCALWDCSRPAQGgLDWFQDYCSSFHHAVALNEGPPGLSPILRPGGIGLKDGLLFSSLSAKVEGKDVGIPECEGAATA 139 7****************9648*********************************************************** PP VOZ 87 kspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyey 172 kspwna+elfdls+l+getirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewhlyey SapurV1A.0032s0720.16.p 140 KSPWNAPELFDLSVLKGETIREWLFFDKPRRAFESGNRKQRSLPDYTGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEY 225 ********************************************************************************** PP VOZ 173 eineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 ein++da+alyrlelk vd+kksakgkv+++s+adlqk++grlta SapurV1A.0032s0720.16.p 226 EINNCDACALYRLELKAVDGKKSAKGKVANESVADLQKQMGRLTA 270 *****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MVINSVEGVA QLEYHDFDLP QNSEQNFYTG FNGMDLGEDA THLVSSYLPS MFLPPSAFLG 60 PKCALWDCSR PAQGGLDWFQ DYCSSFHHAV ALNEGPPGLS PILRPGGIGL KDGLLFSSLS 120 AKVEGKDVGI PECEGAATAK SPWNAPELFD LSVLKGETIR EWLFFDKPRR AFESGNRKQR 180 SLPDYTGRGW HESRKQVMNE FGGLKRSYYM DPQPLNNFEW HLYEYEINNC DACALYRLEL 240 KAVDGKKSAK GKVANESVAD LQKQMGRLTA EFPAEHKRAV KGRTKVNSKA SVGNVYSGST 300 RVAPPTNEAY DNGSGPHYDY LTENLGDYYL TQFKKP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0032s0720.16.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006377435.1	0.0	transcription factor VOZ1 isoform X1
Refseq	XP_024437335.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	1e-165	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9N9L2	0.0	B9N9L2_POPTR; Uncharacterized protein
STRING	POPTR_0011s05890.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-168	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0032s0720.16.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]