PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0060s0610.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 201aa    MW: 23119.8 Da    PI: 6.9629
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0060s0610.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.7e-1484132556
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                             +++rr+++NRe+ArrsR RK++ ++eL + v  L +eN+ L+   ++lk e+
  SapurV1A.0060s0610.1.p  84 RKQRRMISNRESARRSRMRKQKHLDELWTQVVRLRNENSNLI---DRLKHES 132
                             79**************************************99...5555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-1380144IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.47382129IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-1284157No hitNo description
SuperFamilySSF579595.25E-1284131No hitNo description
PfamPF001702.4E-1184138IPR004827Basic-leucine zipper domain
CDDcd147022.01E-1885128No hitNo description
PROSITE patternPS00036087102IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MLPGELTGFH YITPDQSLVP FPNNFGKMQQ RSIPAFHFNR LLNNLQNSPF PQPVREFTPQ  60
SSSLSNKSTS DESEEHQLSI IDERKQRRMI SNRESARRSR MRKQKHLDEL WTQVVRLRNE  120
NSNLIDRLKH ESECHDRVLQ ENARLKEEAS DLRQMLTDLQ IGSPYTATVL KDLEEVPCNT  180
AHLSAESSNQ SVTSSVDLLH *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196103RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0060s0610.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002311422.11e-125basic leucine zipper 43
SwissprotQ9FMC28e-33BZP43_ARATH; Basic leucine zipper 43
TrEMBLB9HIW11e-123B9HIW1_POPTR; BZIP family protein
STRINGPOPTR_0008s11260.11e-124(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-44basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]