PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0067s0500.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family G2-like
Protein Properties Length: 301aa    MW: 34057.9 Da    PI: 9.3585
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0067s0500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.52.7e-3252105255
                 G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                             +rlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vk+Lt++hvkSHLQ+YR+
  SapurV1A.0067s0500.1.p  52 ARLRWTPDLHHCFVHAVERLGGEDRATPKMVLQMMDVKDLTMSHVKSHLQMYRS 105
                             69***************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-3048106IPR009057Homeodomain-like
SuperFamilySSF466893.94E-1551107IPR009057Homeodomain-like
TIGRFAMsTIGR015577.7E-2452105IPR006447Myb domain, plants
PfamPF002491.4E-753104IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MVRFEVESSP IKGSPISSSN DMRNIKRRVG VNYQEIGLRP AMVRPYVRSK MARLRWTPDL  60
HHCFVHAVER LGGEDRATPK MVLQMMDVKD LTMSHVKSHL QMYRSVKNEQ VIQEAGMEGK  120
KNGKEPRVHH SNYFPHTMCC HQNHLNGKGL ITNNDEELLY QGRGVHTPAD GIALKNASVP  180
SQRRQKKVLW IGKRVDEPIL HEEIARKEGE KKPDNYIIFK DLLKSCNSEE RNEQDKMPAG  240
ATGCPKSHRS LEELTETAQR IDGDRMSLSL NSNVSEPLLK FSEAKNSSGL QDVSLELTLA  300
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-1852107257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1852107257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1852107257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1852107257Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0067s0500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006383901.21e-147myb family transcription factor PHL12
TrEMBLA0A3N7GI351e-150A0A3N7GI35_POPTR; Uncharacterized protein
STRINGcassava4.1_021436m2e-99(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93812840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.14e-31G2-like family protein