PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0069s0030.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 429aa    MW: 48085.8 Da    PI: 7.0403
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0069s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12240282754
                             HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                     HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                               Er+RR ri+++++ Lr l+Pk +      K++Ka+iL  A++YI +L
  SapurV1A.0069s0030.1.p 240 VTERNRRTRIKTGLFALRALVPKiS------KMDKAAILGDAIDYIGEL 282
                             67*********************66......***************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.99E-11231287No hitNo description
SuperFamilySSF474591.31E-15232295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.818233282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-15235299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12239288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-10240282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550211.14E-5350417No hitNo description
Gene3DG3DSA:3.30.70.2601.7E-5350420No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MRGLNRAMER LRPLVGSNAW DYCVVWKLGD DPSRIHGEVV ISSEPRWLYH DTATTIDSNT  60
LLEVAGTQVL IPVIGGLVEL FAAKHMEKDG KMIESIRAHC HVPVKQEAVT EHGYSNSSFN  120
DHCLDSLFEE NLPHSCHLLS LIPHAQFLLP LTQPRNSIIF EGSSSGSNPS NEAPSLVSYA  180
SQLPQHGHLE LSTGKSSGSR KSYHDENILK QRTCFAECNK KVPKVMRRSE KDDYKSKNLV  240
TERNRRTRIK TGLFALRALV PKISKMDKAA ILGDAIDYIG ELLNEVKNLQ DEIKNAEEEE  300
CRASNIELKT SKLEIYQEEH VSSSKVHQDS SGFVEKKGAE VQLEVDQISE RHFLLKFLCE  360
QRQGGFGRLM ETIHSLGLQI LDVNITTFNG KVLNILKVEA DKDIHPKILR KSLIELTGHL  420
IQTLGSQI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0069s0030.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006380014.10.0transcription factor bHLH90
TrEMBLA0A3N7FFE60.0A0A3N7FFE6_POPTR; Uncharacterized protein
STRINGPOPTR_0008s19390.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF122653033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.12e-43bHLH family protein