PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0069s0030.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 344aa    MW: 38647 Da    PI: 7.2522
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0069s0030.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.42.2e-12155197754
                             HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                     HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                               Er+RR ri+++++ Lr l+Pk +      K++Ka+iL  A++YI +L
  SapurV1A.0069s0030.2.p 155 VTERNRRTRIKTGLFALRALVPKiS------KMDKAAILGDAIDYIGEL 197
                             67*********************66......***************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.00E-10146202No hitNo description
SuperFamilySSF474599.16E-16147211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.818148197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-15150214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12154203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-10155197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.2E-5265335No hitNo description
SuperFamilySSF550218.01E-6265332No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MEKDGKMIES IRAHCHVPVK QEAVTEHGYS NSSFNDHCLD SLFEENLPHS CHLLSLIPHA  60
QFLLPLTQPR NSIIFEGSSS GSNPSNEAPS LVSYASQLPQ HGHLELSTGK SSGSRKSYHD  120
ENILKQRTCF AECNKKVPKV MRRSEKDDYK SKNLVTERNR RTRIKTGLFA LRALVPKISK  180
MDKAAILGDA IDYIGELLNE VKNLQDEIKN AEEEECRASN IELKTSKLEI YQEEHVSSSK  240
VHQDSSGFVE KKGAEVQLEV DQISERHFLL KFLCEQRQGG FGRLMETIHS LGLQILDVNI  300
TTFNGKVLNI LKVEADKDIH PKILRKSLIE LTGHLIQTLG SQI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0069s0030.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006380014.10.0transcription factor bHLH90
TrEMBLA0A3N7FFE60.0A0A3N7FFE6_POPTR; Uncharacterized protein
STRINGPOPTR_0008s19390.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.12e-34bHLH family protein