PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0134s0150.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 460aa    MW: 49084.8 Da    PI: 7.7743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0134s0150.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62.1e-20222271255
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                             +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  SapurV1A.0134s0150.1.p 222 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 271
                             7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.712222279IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-33222280IPR001471AP2/ERF domain
SMARTSM003806.3E-37222285IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-22222280IPR016177DNA-binding domain
PfamPF008474.1E-14222271IPR001471AP2/ERF domain
PRINTSPR003671.3E-11223234IPR001471AP2/ERF domain
CDDcd000187.59E-15230281No hitNo description
PRINTSPR003671.3E-11245261IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MCILKVANQR GDPGEYTRYP ATGSYDSQGE RSYTAPQVFS QSNQPIEQQV EVTQPPHMFM  60
GYSSSTAGMS SMVSELTHVV SGQRGSSGDW GSYGGLGLGG ATITSNFGQA PPGSNPSTPA  120
SPPLSAYSST SGSGSGLWIG QKRGREEEAG AAAQLMESLP RVYRGFSDLR SSQGDSSSSA  180
ATATEEVSAP TTVIPTTTTT STTATPSSET ASLEETGEQR RRYRGVRQRP WGKWAAEIRD  240
PHKAARVWLG TFDTAEAAAR AYDEAALRFR GNRAKLNFPE NVRLLPSQMQ NVTASQVPIS  300
QSQLSSHSQL QPISSPRQQA QRPPQAAAPA LFQSQADIMR DYWEYSQLLQ GSGDFHGQQR  360
QRQQPPPSSL IQHMFYNPQV ASLQSPALSS LSSSSSLAAI SSGSLPSTFS PSAASSFPLL  420
FAGQQLGYFR PPQNQNQSSG SDFPVPPWTD SSHNPSSNG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22221282163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0134s0150.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002302164.10.0ethylene-responsive transcription factor ABR1
TrEMBLB9GT850.0B9GT85_POPTR; Uncharacterized protein
STRINGPOPTR_0005s21690.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.15e-16ERF family protein