PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0139s0400.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 705aa    MW: 78821.9 Da    PI: 5.8949
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0139s0400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822145.93.5e-45762171136
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaag 83 
                             gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +gs+p   +++a+ 
  SapurV1A.0139s0400.1.p  76 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsksQGSRPAgGTSAAVT 162
                             6899*****************************************************************987788899864444444 PP

                  DUF822  84 ssas...aspesslq.sslkssalaspvesysaspksssfpspssldsislasaasl 136
                             ss+s    +p+++    + +s   + pve  s+++k + +p ps +d+  ++++   
  SapurV1A.0139s0400.1.p 163 SSSShlvSQPTTPPGsIRGVSPGHRNPVEYNSCRMKGVFIPNPSPYDQSASSQS--Q 217
                             433334333444444566788999***********************9877643..3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.8E-3878214IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.08E-182263700IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.807.9E-201266698IPR013781Glycoside hydrolase, catalytic domain
PfamPF013736.7E-108270689IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71301315IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71322340IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71344365IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060348356IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008421.4E-6427436IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.3E-71437459IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71510529IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71544560IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71561572IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.3E-71579602IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-6582592IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.3E-71619641IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.4E-6670684IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.4E-6685699IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    Send to blast
MRESMATDIQ KLIGTSEEDD EEMDMDVKEE DEENGGKHIA AQIMVGMDGG MTSNSSDNQF  60
QHHQQFQEQV SSPGGGGARR SRPLEEKERT KLRERHRRAI TARILAGLRR HGNYNLRVRA  120
DINDVIAALA REAGWVVLPD GTTFPSKSQG SRPAGGTSAA VTSSSSHLVS QPTTPPGSIR  180
GVSPGHRNPV EYNSCRMKGV FIPNPSPYDQ SASSQSQTPG MVGEGREQTE SDPRVGGSMD  240
TINDKQIVAI PPIPKLTERD FAGSPFIPVY VMLPLGAINM KCELVDPDGL LKQLKVLKSA  300
NVDGVMVDCW WGIVEAHAPQ EYNWNGYKRL FQMVHELKLK LQVVMSFHEC GGNVGDDVCI  360
PLPNWVAEIG RSNPDIFFTD REGRRNPECL SWGIDKERVI RGRTAIEVYF DYMRSFRVEF  420
DEFFEDGIIS MVEVGLGPCG ELRYPSCPVK HGWRYPGIGE FQCYDKYFLK SLKKTAEARG  480
HPFWARGPDN AGSYNSQPHE TGFFCDGGDY DGYYGRFFLN WYARILVDHG DRVLSLAKLA  540
FEGTQIAAKL LGIHWWYKTA SHAAELTAGF YNPCNHDGYA AIVATLKKHG AILNFSCSEL  600
WAVDQQVDFA EAHSDPEGLV WQVLNAAWDV GIPVASENAL PCYDRVMYNK ILDNAKPLND  660
PDGRHFLSFT YLRLSPLLME RQTYMEFERF VKRMHGEAVL DLQV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdr_A1e-15626669711444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0139s0400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024441307.10.0LOW QUALITY PROTEIN: beta-amylase 7
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A3N7FY510.0A0A3N7FY51_POPTR; Beta-amylase
STRINGPOPTR_0014s07940.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]