PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0191s0340.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 197aa MW: 22779.2 Da PI: 5.2832

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0191s0340.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.1	1e-14	81	131	4	54
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++++rr+ +NRe+ArrsR RK++ ++eL v + +eN++L ++l++ ++ SapurV1A.0191s0340.1.p 81 DRKQRRMVSNRESARRSRMRKQKHLDELWSQVVWFRNENHQLLDKLNRVTE 131 689*******************************************99876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.8E-13	78	142	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.979	80	143	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-12	81	131	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.5E-13	82	131	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-11	82	156	No hit	No description
CDD	cd14702	2.73E-19	83	134	No hit	No description
PROSITE pattern	PS00036	0	85	100	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0042803	Molecular Function	protein homodimerization activity
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence Send to blast
MQPSEFTGLH YPAPSNPPPY SDHFIMSQNT SQEFQFHQFT NPYYNFQIPS QVQEFSLQAS 60 CMSSISTSDE ADEQHLSLIN DRKQRRMVSN RESARRSRMR KQKHLDELWS QVVWFRNENH 120 QLLDKLNRVT ECHDRVVQEN VQLKEETSEL RQMLTAMQLS SPYPSLKDLE EITSDTAYLG 180 AESSNQSITS SSDLLG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	94	101	RRSRMRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269\|PubMed:26973252}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00389	DAP	Transfer from AT3G30530	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0191s0340.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011012258.1	1e-111	PREDICTED: basic leucine zipper 43-like
Swissprot	Q9FMC2	6e-46	BZP43_ARATH; Basic leucine zipper 43
TrEMBL	B9NC16	1e-102	B9NC16_POPTR; BZIP family protein
STRING	POPTR_0017s14490.1	1e-107	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1604	33	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	7e-50	basic leucine-zipper 42

Link Out ? help Back to Top
Phytozome	SapurV1A.0191s0340.1.p

Publications ? help Back to Top
Nowak K,Gaj MD Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis. J. Plant Physiol., 2016. 193: p. 119-26 [PMID:26973252] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]