PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0273s0150.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 157aa    MW: 18593.9 Da    PI: 10.5507
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0273s0150.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.61.3e-07117139124
                     AP2   1 sgykGVrwdkkrgrWvAeIrdpse 24 
                             ++y+GVr+++ +grW+Ae+rd  +
  SapurV1A.0273s0150.1.p 117 KKYHGVRQRP-WGRWAAELRDRDW 139
                             59********.*********9433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.3E-1917154IPR017392AP2/ERF transcription factor ERF/PTI6
SuperFamilySSF541714.71E-5118148IPR016177DNA-binding domain
PROSITE profilePS5103212.536118156IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-7118144IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MFSPKNQTHK RLDHIKRMDR FSTKYTEHKT VTNKLVRWED SKATRIVRIS VTDANATDLS  60
EDENEEPKIQ HPRIKKHINE IRMKNCSDRA ARDAAKSSRQ QAVKKNSRDQ YYYPEGKKYH  120
GVRQRPWGRW AAELRDRDWL GRWDLGKEGG CRWDLG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0273s0150.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002320179.25e-86pathogenesis-related genes transcriptional activator PTI6
TrEMBLB9I8U11e-84B9I8U1_POPTR; ERF family protein
STRINGPOPTR_0014s09020.12e-73(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-20cytokinin response factor 4