PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0318s0110.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 192aa    MW: 21377.6 Da    PI: 7.9967
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0318s0110.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.41.6e-29101159159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +dDg++WrKYG+K+vk+s++pr+YY+C+s+gC+vkk+ver++ed ++v++ Y g Hnhe
  SapurV1A.0318s0110.1.p 101 MDDGFKWRKYGKKSVKNSPHPRNYYKCSSSGCSVKKRVEREREDSRYVITAYDGVHNHE 159
                             59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-3287161IPR003657WRKY domain
SuperFamilySSF1182909.15E-2793161IPR003657WRKY domain
PROSITE profilePS5081130.81396161IPR003657WRKY domain
SMARTSM007741.3E-32101160IPR003657WRKY domain
PfamPF031065.0E-23102159IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MGCPENPKPN YNFSYIDEGL DPSTIEFQVS DYLMLDDGFA VDDSSSQSIL SSEHVASGSS  60
AGHSGATSRN NSIKHKTGAK KNKTEVEQRI AFRTKSDMEI MDDGFKWRKY GKKSVKNSPH  120
PRNYYKCSSS GCSVKKRVER EREDSRYVIT AYDGVHNHES PCMFHYSNQM PLMAPSAWTL  180
QPSSLHSSSS S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-2589161274WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0318s0110.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024461002.11e-108probable WRKY transcription factor 51
TrEMBLA0A2K1ZR011e-107A0A2K1ZR01_POPTR; Uncharacterized protein
STRINGPOPTR_0007s06720.11e-105(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-38WRKY DNA-binding protein 51