PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0326s0070.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 135aa    MW: 15517.1 Da    PI: 4.2518
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0326s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.43.7e-12121152128
                     NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                             ppG++F P+d++l+      ++e++k       k v++y+   + L        +ew+fFs+r+k           t++gy  +  +
  SapurV1A.0326s0070.1.p  12 PPGYKFCPNDDDLI------NLEREKW-----SKVVNLYHDFKRGL-------ANEWFFFSTRSKDD-----DVILTENGYYATDPE 75 
                             78888888888888......2222222.....23456665444445.......479******99865.....4568999**997766 PP

                     NAM  89 .dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                              + +v    +++vg  ktL fy+g+ p+g++tdW+++e+++
  SapurV1A.0326s0070.1.p  76 gTDPVRW-MNNTVGYVKTLNFYQGSPPQGTETDWMVEEFSV 115
                             2445555.8999***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.8361134IPR003441NAC domain
SuperFamilySSF1019414.97E-176118IPR003441NAC domain
PfamPF023651.7E-1112114IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MAASGAQAWN FPPGYKFCPN DDDLINLERE KWSKVVNLYH DFKRGLANEW FFFSTRSKDD  60
DVILTENGYY ATDPEGTDPV RWMNNTVGYV KTLNFYQGSP PQGTETDWMV EEFSVNPEFV  120
PVNKDDHSTQ EKVM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0326s0070.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2091842e-36AC209184.1 Populus trichocarpa clone POP031-J16, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011044742.11e-61PREDICTED: NAC domain-containing protein 21/22-like
TrEMBLA0A3N7HSH02e-54A0A3N7HSH0_POPTR; Uncharacterized protein
STRINGPOPTR_0015s00940.14e-55(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14452718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55210.11e-11NAC domain containing protein 63