PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0443s0100.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

Dof

Protein Properties

Length: 512aa MW: 55649.7 Da PI: 5.6316

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0443s0100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	151	211	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s SapurV1A.0443s0100.1.p 151 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 211 7899******************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-31	148	208	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.1E-32	153	209	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.975	155	209	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	157	193	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence Send to blast
MLEPKDPAIK LFGKTIQVTE ISVTTAVATT TTFIDDSQDQ DRISCADSSL CDTDTDNNKR 60 DHGEEDIEAD DKDPVEKKLI GKQEDGVSPV AEDGVSPVAT EELSNPDATS ATSENHKTTS 120 IEKESAALKT SKTEEEHSDT SNSQEKTLKK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH 180 FCKNCQRYWT AGGTMRNVPV GAGRRKNKNS ASHCHHLTIP EALQNVRADV SNGVYHPSMK 240 TNGTVLTFGS DKPLHESMAS VLNLADKTTW KCTRNGSHKP EAVRVPVSYG SGENSDDHSN 300 GSSVTVSNSI DDAGKSMLKE SAVQNCQGFP PEIPCYPGVP WPYPWNSGTC PLPPPAFCPP 360 GFPMPFYPAA AYWGCTVPGA WNIPWLPQPS SPKQTSLSSG PNSPTLGKHS RDENMLKCSN 420 SEEGESAKEN NTERCLWIPK TLRIVDPGEA AKSSIWTTLG IKNDKPDSIG GQGLFKVFES 480 KAEKNHEAET SPVLQANPAA LSRSLQFQES S*

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence Send to blast

MLEPKDPAIK LFGKTIQVTE ISVTTAVATT TTFIDDSQDQ DRISCADSSL CDTDTDNNKR  60
DHGEEDIEAD DKDPVEKKLI GKQEDGVSPV AEDGVSPVAT EELSNPDATS ATSENHKTTS  120
IEKESAALKT SKTEEEHSDT SNSQEKTLKK PDKILPCPRC NSMDTKFCYY NNYNVNQPRH  180
FCKNCQRYWT AGGTMRNVPV GAGRRKNKNS ASHCHHLTIP EALQNVRADV SNGVYHPSMK  240
TNGTVLTFGS DKPLHESMAS VLNLADKTTW KCTRNGSHKP EAVRVPVSYG SGENSDDHSN  300
GSSVTVSNSI DDAGKSMLKE SAVQNCQGFP PEIPCYPGVP WPYPWNSGTC PLPPPAFCPP  360
GFPMPFYPAA AYWGCTVPGA WNIPWLPQPS SPKQTSLSSG PNSPTLGKHS RDENMLKCSN  420
SEEGESAKEN NTERCLWIPK TLRIVDPGEA AKSSIWTTLG IKNDKPDSIG GQGLFKVFES  480
KAEKNHEAET SPVLQANPAA LSRSLQFQES S*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0443s0100.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011008971.1	0.0	PREDICTED: cyclic dof factor 3-like
Refseq	XP_011013651.1	0.0	PREDICTED: cyclic dof factor 3-like
TrEMBL	A0A2K2ATH1	0.0	A0A2K2ATH1_POPTR; Uncharacterized protein
STRING	POPTR_0004s12120.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF625	34	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	1e-108	cycling DOF factor 2

Link Out ? help Back to Top
Phytozome	SapurV1A.0443s0100.1.p