PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0500s0280.2.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

VOZ

Protein Properties

Length: 445aa MW: 49107.9 Da PI: 5.0386

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0500s0280.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	448	1.1e-137	188	404	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatak 87 pppsaf+gpkcalwdctrpaqg+ew++dycssfhatlalneg+pg++pvlrp+gi+lkd+llf+al+ak+qgk+vgip+cegaa +k SapurV1A.0500s0280.2.p 188 PPPSAFMGPKCALWDCTRPAQGAEWCEDYCSSFHATLALNEGPPGMSPVLRPRGINLKDNLLFDALTAKMQGKNVGIPQCEGAAVMK 274 89*********************************************************************************** PP VOZ 88 spwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyei 174 spwnaaelfdlsllegetirewlffdkprraf+sgnrkqrslpdysgrgwhesrkqvmke+gg+k+syymdpqp++++ewhlyeyei SapurV1A.0500s0280.2.p 275 SPWNAAELFDLSLLEGETIREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKELGGKKKSYYMDPQPPGCHEWHLYEYEI 361 *********************************************************************************** PP VOZ 175 neldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 n++da+alyrlelkl+ +kk++kgkvskdsl+dlqkk+grlta SapurV1A.0500s0280.2.p 362 NNCDACALYRLELKLAGGKKTPKGKVSKDSLVDLQKKMGRLTA 404 ***************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence Send to blast
MQRGGKSKCA STSHHLLMDN AKSRLNDLQE RFFNIQAARE EGRNNDVALL EEQDISLGSF 60 SEDIGRLLQL CEEEDDATSP LTMQTVLKLE TQPEPNFQNL NLGNLTTFQD EYLVNSHSQE 120 VGFQGFHQHN SSSGLQSVAV SGPDITTLLD CHQFTLDEEF DPGLFVGTND TKECGINAES 180 NNLQYISPPP SAFMGPKCAL WDCTRPAQGA EWCEDYCSSF HATLALNEGP PGMSPVLRPR 240 GINLKDNLLF DALTAKMQGK NVGIPQCEGA AVMKSPWNAA ELFDLSLLEG ETIREWLFFD 300 KPRRAFDSGN RKQRSLPDYS GRGWHESRKQ VMKELGGKKK SYYMDPQPPG CHEWHLYEYE 360 INNCDACALY RLELKLAGGK KTPKGKVSKD SLVDLQKKMG RLTAVVTADN SPSDKGKTNA 420 DTEVGSVDFG SAQDQKTSGT GHGP*

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence Send to blast

MQRGGKSKCA STSHHLLMDN AKSRLNDLQE RFFNIQAARE EGRNNDVALL EEQDISLGSF  60
SEDIGRLLQL CEEEDDATSP LTMQTVLKLE TQPEPNFQNL NLGNLTTFQD EYLVNSHSQE  120
VGFQGFHQHN SSSGLQSVAV SGPDITTLLD CHQFTLDEEF DPGLFVGTND TKECGINAES  180
NNLQYISPPP SAFMGPKCAL WDCTRPAQGA EWCEDYCSSF HATLALNEGP PGMSPVLRPR  240
GINLKDNLLF DALTAKMQGK NVGIPQCEGA AVMKSPWNAA ELFDLSLLEG ETIREWLFFD  300
KPRRAFDSGN RKQRSLPDYS GRGWHESRKQ VMKELGGKKK SYYMDPQPPG CHEWHLYEYE  360
INNCDACALY RLELKLAGGK KTPKGKVSKD SLVDLQKKMG RLTAVVTADN SPSDKGKTNA  420
DTEVGSVDFG SAQDQKTSGT GHGP*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0500s0280.2.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC213156	0.0	AC213156.1 Populus trichocarpa clone POP076-I18, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002326034.1	0.0	transcription factor VOZ1
Refseq	XP_024447611.1	0.0	transcription factor VOZ1
Swissprot	Q9SGQ0	1e-161	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	B9IQS1	0.0	B9IQS1_POPTR; VOZ family protein
STRING	POPTR_0019s12260.1	0.0	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-163	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0500s0280.2.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]