PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0554s0190.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 242aa    MW: 26891.8 Da    PI: 4.2733
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0554s0190.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.51.2e-07143185446
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                             +k+ rr  +N+ AA rsR+RKk+ +  Le k+  Le+e ++L 
  SapurV1A.0554s0190.2.p 143 SKKRRRQLRNKDAAVRSRERKKMHVRDLEVKSRYLEGECRRLD 185
                             6999**********************************98775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-9135202No hitNo description
SMARTSM003380.0039139204IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622142199IPR004827Basic-leucine zipper domain
PfamPF077161.9E-6143184IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-9144200No hitNo description
CDDcd147045.28E-18145196No hitNo description
PROSITE patternPS000360147162IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MKFLQGDDVP GQIDWDNILD GLPFSDNIFE LEPPSTTYLQ PIDDSSNSLS PAEVSSWIGE  60
IETLLMKDDD DKVDQLDDCN AFLADILVDS PAAHESGGEV LDASTDKDST SSDDADGGPK  120
EKDDGAEEKT KNNEEEDPDD TVSKKRRRQL RNKDAAVRSR ERKKMHVRDL EVKSRYLEGE  180
CRRLDRLLQC FIAENHALRL CLQRGGATGV TSARQESAVL VMGMFHSPYC SLFSSLIVVF  240
F*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0554s0190.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU2278300.0CU227830.1 Populus EST from severe drought-stressed leaves.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024457643.11e-132bZIP transcription factor 60 isoform X2
TrEMBLB9H5X31e-128B9H5X3_POPTR; Uncharacterized protein
STRINGPOPTR_0005s27930.11e-129(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.11e-23basic region/leucine zipper motif 60