PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0586s0170.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

NAC

Protein Properties

Length: 202aa MW: 22750.3 Da PI: 5.6485

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0586s0170.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.2	1.7e-45	12	140	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 p+Gf FhPtdeel++++Lk k+ g ++ +i+ev+++++ePw+Lp ++++++++ wyfFs+r+ ky++ k+++r+tk+gyWk t SapurV1A.0586s0170.1.p 12 PKGFGFHPTDEELINHFLKLKMIGGCDHEVAIIAEVNVCNSEPWELPglSEIQSNDTVWYFFSPRNYKYSNRKQASRTTKAGYWKVT 98 89*****************99988777699***********6449999999************************** PP NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 g+d+ ++++ +ge++g kk+Lvfy+gr p+g++t+Wvmhey+ SapurV1A.0586s0170.1.p 99 GNDRIIMAAkTGEQIGKKKSLVFYNGRVPNGVRTNWVMHEYN 140 ***9878999*************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.84E-52	3	158	IPR003441	NAC domain
PROSITE profile	PS51005	50.69	11	159	IPR003441	NAC domain
Pfam	PF02365	2.9E-24	12	140	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
MTSSAAPFPS APKGFGFHPT DEELINHFLK LKMIGGCDHE VAIIAEVNVC NSEPWELPGL 60 SEIQSNDTVW YFFSPRNYKY SNRKQASRTT KAGYWKVTGN DRIIMAAKTG EQIGKKKSLV 120 FYNGRVPNGV RTNWVMHEYN PTFNFHNQRD FVLCKLKRNS DDELTCEEGG SSSNVASDFP 180 NNVTEEDQLE AFLGVDEGYY N*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	5e-36	10	156	16	162	NO APICAL MERISTEM PROTEIN
1ut4_B	5e-36	10	156	16	162	NO APICAL MERISTEM PROTEIN
1ut7_A	5e-36	10	156	16	162	NO APICAL MERISTEM PROTEIN
1ut7_B	5e-36	10	156	16	162	NO APICAL MERISTEM PROTEIN
3swm_A	5e-36	10	156	19	165	NAC domain-containing protein 19
3swm_B	5e-36	10	156	19	165	NAC domain-containing protein 19
3swm_C	5e-36	10	156	19	165	NAC domain-containing protein 19
3swm_D	5e-36	10	156	19	165	NAC domain-containing protein 19
3swp_A	5e-36	10	156	19	165	NAC domain-containing protein 19
3swp_B	5e-36	10	156	19	165	NAC domain-containing protein 19
3swp_C	5e-36	10	156	19	165	NAC domain-containing protein 19
3swp_D	5e-36	10	156	19	165	NAC domain-containing protein 19
4dul_A	5e-36	10	156	16	162	NAC domain-containing protein 19
4dul_B	5e-36	10	156	16	162	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269\|PubMed:17947243, ECO:0000269\|PubMed:18443413, ECO:0000269\|PubMed:22826500, ECO:0000269\|PubMed:24329768}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0586s0170.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011035248.1	1e-136	PREDICTED: NAC domain-containing protein 69-like isoform X2
Refseq	XP_024440276.1	1e-136	protein NTM1-like 9 isoform X2
Swissprot	F4JN35	3e-49	NTL9_ARATH; Protein NTM1-like 9
TrEMBL	A0A2K1XRY4	1e-134	A0A2K1XRY4_POPTR; Uncharacterized protein
STRING	POPTR_0014s07210.1	1e-130	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2065	25	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	1e-51	NAC transcription factor-like 9

Link Out ? help Back to Top
Phytozome	SapurV1A.0586s0170.1.p

Publications ? help Back to Top
Zheng XY, et al. Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73 [PMID:26139525] Guo T, et al. Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana. Mol Plant, 2017. 10(10): p. 1334-1348 [PMID:28943325]