PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0594s0120.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 193aa    MW: 21399.4 Da    PI: 6.7719
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0594s0120.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-2999157159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +dDg++WrKYG+K+vk+s++pr+YY+C+s gC vkk ver++ed ++v++tY g Hnhe
  SapurV1A.0594s0120.1.p  99 MDDGFKWRKYGKKSVKNSPNPRNYYKCSSGGCDVKKIVERDREDSTFVITTYDGVHNHE 157
                             59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-3187159IPR003657WRKY domain
SuperFamilySSF1182901.18E-2692159IPR003657WRKY domain
PROSITE profilePS5081130.38994159IPR003657WRKY domain
SMARTSM007748.6E-3399158IPR003657WRKY domain
PfamPF031068.0E-23100157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009867Biological Processjasmonic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MDCPGNPNHY YSCFREGFDP PATEFQVSDY LVLDDGFVED ESSSQSMASS EQVPGGSPTG  60
YSGATSRNNG IKCKNGVKKN KIEGGHRVAF RTKSELEVMD DGFKWRKYGK KSVKNSPNPR  120
NYYKCSSGGC DVKKIVERDR EDSTFVITTY DGVHNHESPC TVYYNYNYNQ MPVGVPHAWT  180
LQDSSPHSSS SS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-2487159274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0594s0120.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021947.14e-97PREDICTED: probable WRKY transcription factor 51
SwissprotQ93WU96e-45WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBLA0A2K2ADP45e-94A0A2K2ADP4_POPTR; Uncharacterized protein
STRINGPOPTR_0005s08720.14e-90(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-43WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Yan C, et al.
    Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis.
    Mol. Cell, 2018. 70(1): p. 136-149.e7
    [PMID:29625034]