PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0637s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 139aa    MW: 16432.5 Da    PI: 9.3269
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0637s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.13.9e-2421271123
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknr.atksgyWk 84 
                             +p GfrF+Ptdeel+ + L +k++g++++l ++i e+++y+ +P+dL+ ++ +a ++ e +++skr+ +       +r +   g Wk
  SapurV1A.0637s0010.1.p   2 VPHGFRFNPTDEELI-QVLDRKASGQEMPL-HFILEMNVYERDPQDLEwNESTAlSNGERFYYSKREIND------SReVHGLGWWK 80 
                             589************.88************.89**************96433332556889999987753......3325678**** PP

                     NAM  85 atgkdkevlsk...kgelvglkktLvfy.....kgrapkgektdWvm 123
                             at + k+v++k   ++ lvg k+ L+f+     + ++++++kt+W++
  SapurV1A.0637s0010.1.p  81 ATSHVKKVYAKdhrDQPLVGNKRPLTFHrfkdsERNRNNAVKTNWII 127
                             **********96545555**********7777656778889****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.3322138IPR003441NAC domain
SuperFamilySSF1019414.05E-242127IPR003441NAC domain
PfamPF023651.6E-123127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MVPHGFRFNP TDEELIQVLD RKASGQEMPL HFILEMNVYE RDPQDLEWNE STALSNGERF  60
YYSKREINDS REVHGLGWWK ATSHVKKVYA KDHRDQPLVG NKRPLTFHRF KDSERNRNNA  120
VKTNWIILAR SYQVYAIL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-15212715135Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0637s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011026397.11e-79PREDICTED: NAC domain-containing protein 86-like
TrEMBLB9HH644e-78B9HH64_POPTR; Uncharacterized protein
STRINGPOPTR_0007s02050.17e-79(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15526612
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.25e-18NAC domain containing protein 41