PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0760s0050.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 323aa    MW: 36252.8 Da    PI: 7.1858
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0760s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.65.5e-33186243259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers edp++v++tYeg+Hnh+
  SapurV1A.0760s0050.1.p 186 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCMVKKRVERSFEDPSTVITTYEGQHNHH 243
                             8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-34170245IPR003657WRKY domain
SuperFamilySSF1182902.09E-29177245IPR003657WRKY domain
PROSITE profilePS5081132.087180245IPR003657WRKY domain
SMARTSM007742.2E-39185244IPR003657WRKY domain
PfamPF031064.8E-26186243IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MSNENEDPYH YDPFHYNIQQ GNNRPVSVFP FFNDNLSMYN DQQTPAQNLQ GFSDDPSYMS  60
FTDHLHGSMD HYNTYSRALD VSCSSSEVIS PVDQGGTGKI GAGESAATNE NIPSTPNSSI  120
SNSSSNDGAT EEESGKIKKH KQPKESTADG DNDGDAKKVS KTKKKEKRKK EPRFAFVTKS  180
EIDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTTQKCMVKK RVERSFEDPS TVITTYEGQH  240
NHHCPATLRG NAAGMLSPSL LASTSIGQSF PQDFLTRFLP PSNQGDQTSI FYQNHDPQHQ  300
RYAPEYGLLQ DLVPSFIHKK QP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-291782461078Probable WRKY transcription factor 4
2lex_A7e-291782461078Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0760s0050.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002306743.10.0probable WRKY transcription factor 71
TrEMBLB9H8230.0B9H823_POPTR; Uncharacterized protein
STRINGPOPTR_0005s22480.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22313483
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.11e-54WRKY DNA-binding protein 71