PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0787s0040.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 353aa    MW: 38740 Da    PI: 5.9455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0787s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.35.8e-21155204255
                     AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                             +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae Aa+a+++a+++++g
  SapurV1A.0787s0040.1.p 155 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEAAARAYDEAALRFRG 204
                             8********.**********66.....56*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.9E-33154213IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-23155213IPR016177DNA-binding domain
PROSITE profilePS5103225.686155212IPR001471AP2/ERF domain
CDDcd000182.34E-22155214No hitNo description
PfamPF008471.9E-14155204IPR001471AP2/ERF domain
SMARTSM003804.0E-37155218IPR001471AP2/ERF domain
PRINTSPR003678.5E-12156167IPR001471AP2/ERF domain
PRINTSPR003678.5E-12178194IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006970Biological Processresponse to osmotic stress
GO:0009749Biological Processresponse to glucose
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MCEIKVANRG KRAVKKEAGS VEEWPLPAML SGLDREREMS VMVTALTHVV AGNVPEEFSD  60
CLSEAVSNNQ DTCAHGDLSA KREREEDGGG GQEYKRYGGA FGDDFSLHGG GSSSAGRATG  120
KSITTTGTMT PATTQMAFTP VYEYNETCRE EPRRKYRGVR QRPWGKWAAE IRDPFKAARV  180
WLGTFDTAEA AARAYDEAAL RFRGNKAKLN FPENVKLRPS PSNPITSQLT ISDSPRSTGL  240
LSVPTPTEAI VHSQALHPTQ NREISREQVN QPQLFLDFGG YQRQPISLYD QMFLPPPVVS  300
SYLSSSAEHS DHMFLPAQQP GEIRPATDSQ SGGAEFQLPE WSDYTYYTSS SG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A5e-22154215163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-22154215466ATERF1
3gcc_A5e-22154215466ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00584DAPTransfer from AT5G64750Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0787s0040.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021970.10.0PREDICTED: ethylene-responsive transcription factor ABR1-like isoform X2
TrEMBLA0A3N7EX281e-173A0A3N7EX28_POPTR; Uncharacterized protein
STRINGPOPTR_0005s08940.11e-174(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49333254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-21ethylene response factor 110