PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0787s0140.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 191aa    MW: 21234 Da    PI: 6.7589
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0787s0140.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY22.62.2e-07157170114
                             ---SS-EEEEEEE- CS
                    WRKY   1 ldDgynWrKYGqKe 14 
                             ldDgy+WrKYGqK+
  SapurV1A.0787s0140.2.p 157 LDDGYKWRKYGQKV 170
                             59***********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-9142178IPR003657WRKY domain
SuperFamilySSF1182901.83E-6150178IPR003657WRKY domain
PROSITE profilePS5081110.189152190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1901141Biological Processregulation of lignin biosynthetic process
GO:1904369Biological Processpositive regulation of sclerenchyma cell differentiation
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MAATSQATLN QQPLFEDQDM PPQMGFFSFP SQYLTYPQLA SCQQSLKGFI IPPSLAVDAP  60
CTTNLTETLL LSSATNKQRE EDTIASDLEG PHLLSLQRSS ANLWAWGEVN DCSNSKRSGS  120
GGDHLGVSTI KMKKIKAWRK VREPRFCFKT LSEVDVLDDG YKWRKYGQKV ELLSLHARQL  180
SREETCGEVS *
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0787s0140.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1452930.0EF145293.1 Populus trichocarpa clone WS01122_O17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011021959.11e-100PREDICTED: probable WRKY transcription factor 13
RefseqXP_011021960.11e-100PREDICTED: probable WRKY transcription factor 13
RefseqXP_011021961.11e-100PREDICTED: probable WRKY transcription factor 13
RefseqXP_011021962.11e-100PREDICTED: probable WRKY transcription factor 13
RefseqXP_011021963.11e-100PREDICTED: probable WRKY transcription factor 13
SwissprotQ9SVB72e-23WRK13_ARATH; Probable WRKY transcription factor 13
TrEMBLA9PAR44e-97A9PAR4_POPTR; WRKY family protein
STRINGPOPTR_0007s06930.11e-96(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.15e-23WRKY DNA-binding protein 13