PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0869s0100.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 493aa    MW: 53939.3 Da    PI: 5.9758
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0869s0100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.3e-30261320159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  SapurV1A.0869s0100.2.p 261 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGNHNHP 320
                             58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-32246322IPR003657WRKY domain
SuperFamilySSF1182903.14E-27255322IPR003657WRKY domain
PROSITE profilePS5081128.851256322IPR003657WRKY domain
SMARTSM007742.2E-37261321IPR003657WRKY domain
PfamPF031065.3E-27262320IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MDIDLSLKMD AENEEEEDGD EERHGREGEG NHQESEVDRE NTHDINEAAG GATTTTTIGG  60
GGGGGGGDDS SLELSLQESS KTEEISRMKE ENKVLRKIVD QTMKDFHDLQ IRFAALQQNL  120
DQKKDPQISL GLHANDKKAV QEVAKAIPRQ FDSNYIQRHQ AVASTKGDST DGEGADELGL  180
SLRLQTSSSQ QEREEDMEEN NKEDPTALFA PAISQNNNNN SNSNKVQRTD LGGSGISAHG  240
ASLANRKARV SVRARCQGAT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ  300
RCLEDMSILI TTYEGNHNHP LPVGATAMAS TASAAASFML MNSSNPLSDG MISAGQANSL  360
PFHAWNPQYP PNFRTVNPND PSKGIVLDLT HDRDRSVLQY PIMASSSQYS SSSAGHNQYP  420
GSFSNWMQSR SSSYQNSAAT VHHEERKLGE TGYNRIQNLP ESFMVKNNNF TFHHESISIA  480
IIKKVLVVIN KP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-22248324176WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0869s0100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024466667.10.0probable WRKY transcription factor 9
TrEMBLB9GF770.0B9GF77_POPTR; Uncharacterized protein
STRINGPOPTR_0001s21580.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.16e-56WRKY DNA-binding protein 9