PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0958s0170.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

NAC

Protein Properties

Length: 258aa MW: 29879 Da PI: 6.0644

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0958s0170.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	134.6	6.8e-42	7	129	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 pGfrFhPt++el+++yL+k v+g+++ ++i ++iy++ePwdLp +k +e+ewyf ++r+ r++r+t++gyWkatg+d SapurV1A.0958s0170.1.p 7 PGFRFHPTEQELLDFYLTKAVSGQDMV--DIIGFLNIYNHEPWDLPGLAKIGEREWYFLVHREAIF---GRPRRTTEKGYWKATGSD 88 9*********************954..589**********8888899****98876...59************ PP NAM 90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ ++ ++l g kktLvfy+grap+g+ktdWvm+eyrl SapurV1A.0958s0170.1.p 89 RPIRCSmdLKRLLGHKKTLVFYRGRAPRGSKTDWVMNEYRL 129 98766778*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	3.4E-47	5	147	IPR003441	NAC domain
PROSITE profile	PS51005	49.034	5	147	IPR003441	NAC domain
Pfam	PF02365	2.6E-23	7	129	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence Send to blast
MEFDELPGFR FHPTEQELLD FYLTKAVSGQ DMVDIIGFLN IYNHEPWDLP GLAKIGEREW 60 YFLVHREAIF GRPRRTTEKG YWKATGSDRP IRCSMDLKRL LGHKKTLVFY RGRAPRGSKT 120 DWVMNEYRLP GNFFLSKEMV LCKVYRKATP LKVLEQRAAM EETARAPPPN VTSSSPPITQ 180 ENFSSYEQPQ SFNKLLLEQN NVVHRVEGVA AIEEEEEDDR TGYPSQIVGA VPIRELYYEL 240 QSPKPVLDWS LDSFWLN*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-37	2	147	12	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0958s0170.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002307224.3	1e-148	NAC domain-containing protein 22
Refseq	XP_011022209.1	1e-148	PREDICTED: NAC domain-containing protein 100-like
Swissprot	Q10S65	2e-73	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2K2AER3	1e-146	A0A2K2AER3_POPTR; Uncharacterized protein
STRING	POPTR_0005s10610.1	1e-147	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6214	32	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	3e-83	NAC domain containing protein 36

Link Out ? help Back to Top
Phytozome	SapurV1A.0958s0170.1.p

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]