PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0980s0060.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bHLH
Protein Properties Length: 469aa    MW: 51914.9 Da    PI: 5.5374
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0980s0060.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-13262308354
                             HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                     HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             ++h + Er+RR+++N +++ Lr l+P++      K++ a+++ +A++YIk+L
  SapurV1A.0980s0060.1.p 262 TKHFATERQRREHLNGKYAALRNLVPNP-----SKNDRASVVGEAIDYIKEL 308
                             68*************************9.....7****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.516259308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.74E-13260313No hitNo description
SuperFamilySSF474596.02E-16262327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-11262308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-13262317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-11265314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MYVETACFEP NNSMAEGVAT DDGFCHALPL MAGNGTTNSF EEHLKLSMEE FSMNHYPQEE  60
SAAAPVSMEE FQLQNHMAFN NNNTNHHLMQ QYATHLLSYD HSSNWDPNII QFQEMHQGLD  120
QNSSFDATDN TPSSLPPDLL NLFNLPRCTS TSTLLPNSSI SFTNSAHKAP LGFMGVDNTS  180
VRFDSYPLAP QPHLFRELVQ SLPPHGYTLP TPLFGGDQGD DHVDGLSGGG LSYQDGDHGD  240
GVFEFTAEAC IGKGIRKTGK VTKHFATERQ RREHLNGKYA ALRNLVPNPS KNDRASVVGE  300
AIDYIKELLR TVQELKLLVE KKRCGRERIK RRKTEEDGGA DVLDSSNIKV EPDQSAYSNG  360
SLRSSWLQRK SKDTEVDVRL IEDEVTIKLI QRKKVNCLLY VSKVLDELQL DLHHAAGGLI  420
GDYYSFLFNT KINEGSCVYA SAIANKLIEV VDRQYASSSA APAAGSCY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0980s0060.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002323376.10.0transcription factor bHLH91 isoform X1
TrEMBLB9IIJ60.0B9IIJ6_POPTR; Uncharacterized protein
STRINGPOPTR_0016s06900.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31220.14e-80bHLH family protein