PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1040s0080.8.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 274aa    MW: 28638 Da    PI: 6.9086
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1040s0080.8.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822355.2e-11168971150
                  DUF822  71 kgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                              g+kp e +++ g sa++sp+ss++        +sp++sy++sp sssfpsp+s++ + +a+   +sl+p+l++ls++sss+
  SapurV1A.1040s0080.8.p  16 TGCKPVECMDILGVSATTSPCSSYH--------HSPCASYNPSPGSSSFPSPASSSYAANANMdrNSLIPWLKNLSSASSSA 89 
                             59***********************........9*****************98877665554455**********9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.5E-111683IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MRLAVACGCV LKGIMTGCKP VECMDILGVS ATTSPCSSYH HSPCASYNPS PGSSSFPSPA  60
SSSYAANANM DRNSLIPWLK NLSSASSSAS SSKLPHLHIH GGSISAPVTP PLSSPTARTP  120
RIKADWEDQS IRPGWGGQQH YFLPSSTPTS PGRQIVPDPE WFRGIQIPQG CPTSPTFSLV  180
ASNPFGFKEG AFAGGGSNGG SRMWTPGQSG TCSPAIAAGS DHTADIPMAE VISDEFAFRC  240
NATGLVKPWE GERIHEECGS DDLELTLGNS RTR*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1040s0080.8.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1454330.0EF145433.1 Populus trichocarpa clone WS01124_K11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011002765.11e-151PREDICTED: BES1/BZR1 homolog protein 4 isoform X3
SwissprotQ9ZV889e-99BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A3N7G1F01e-145A0A3N7G1F0_POPTR; Uncharacterized protein
STRINGPOPTR_0001s39520.11e-144(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-80BES1/BZR1 homolog 4