PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.1151s0030.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

Nin-like

Protein Properties

Length: 416aa MW: 46765 Da PI: 4.883

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.1151s0030.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	78.7	6.5e-25	324	372	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+d +++F+lpi+dAA++L++c+Tv+K+iCR++G+ RWPhRkiks+ SapurV1A.1151s0030.1.p 324 KLTLNDFREFFHLPIEDAARKLELCPTVVKKICRKHGMTRWPHRKIKSI 372 79*********************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.405	312	392	IPR003035	RWP-RK domain
Pfam	PF02042	5.3E-22	324	372	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence Send to blast
MADPRSVVPY HDPYESPIDY ENLNFMNDAN PSLAGLSSGH GPTSAIPESF SGNEPTSAIP 60 ESFSGNANAN ESILDPNDPY QDPMVWNFYN ENLRVQSHEA GPSHQNQGQS SVGQIPNASF 120 PNASFLDASF PDASFFDASF PNAPIPDGQT SNASGRSEEI FLEGRNIAVW PPEPVPFHCS 180 CCQVLREIIH TDGNYTTKLE IHGRMGIICH AILENRDHVK ATHPEHYMFD FCKKSLENVK 240 DFLQKYCDER RQAGFIMVQD PHTFFYEALC VGYEWMEDLQ YDDFYDPSPS NSGEPQATNQ 300 AEGEIETERP TRSNLALQRE RAGKLTLNDF REFFHLPIED AARKLELCPT VVKKICRKHG 360 MTRWPHRKIK SILRQLTDLK VLSNSIDAEE RARAQAETMR LQEEMRKACS GSAGL*

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence Send to blast

MADPRSVVPY HDPYESPIDY ENLNFMNDAN PSLAGLSSGH GPTSAIPESF SGNEPTSAIP  60
ESFSGNANAN ESILDPNDPY QDPMVWNFYN ENLRVQSHEA GPSHQNQGQS SVGQIPNASF  120
PNASFLDASF PDASFFDASF PNAPIPDGQT SNASGRSEEI FLEGRNIAVW PPEPVPFHCS  180
CCQVLREIIH TDGNYTTKLE IHGRMGIICH AILENRDHVK ATHPEHYMFD FCKKSLENVK  240
DFLQKYCDER RQAGFIMVQD PHTFFYEALC VGYEWMEDLQ YDDFYDPSPS NSGEPQATNQ  300
AEGEIETERP TRSNLALQRE RAGKLTLNDF REFFHLPIED AARKLELCPT VVKKICRKHG  360
MTRWPHRKIK SILRQLTDLK VLSNSIDAEE RARAQAETMR LQEEMRKACS GSAGL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.1151s0030.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024458585.1	0.0	uncharacterized protein LOC18100642
TrEMBL	A0A2K2A6B3	0.0	A0A2K2A6B3_POPTR; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7478	28	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	5e-14	NIN like protein 7

Link Out ? help Back to Top
Phytozome	SapurV1A.1151s0030.1.p