PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1152s0100.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 522aa    MW: 57194.7 Da    PI: 6.2204
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1152s0100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.81e-23209265259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                              DgynWrKYGqK+vk+ + +rsYY+Ct+ +C++kk +e+s++ ++v+ei+++g H h+
  SapurV1A.1152s0100.1.p 209 PDGYNWRKYGQKQVKSPKGSRSYYKCTYFDCCAKK-IECSDHSGHVIEIVNKGMHCHD 265
                             5********************************98.********************97 PP
2WRKY97.96.6e-31382438359
                             -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ +++++v+itY+g H+h+
  SapurV1A.1152s0100.1.p 382 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTNAVIITYKGVHDHD 438
                             9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.191203267IPR003657WRKY domain
SuperFamilySSF1182909.55E-19204267IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.2E-18206267IPR003657WRKY domain
SMARTSM007745.2E-22208266IPR003657WRKY domain
PfamPF031063.9E-15210264IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.9E-32365440IPR003657WRKY domain
PROSITE profilePS5081131.973375440IPR003657WRKY domain
SuperFamilySSF1182903.14E-27375440IPR003657WRKY domain
SMARTSM007746.8E-35380439IPR003657WRKY domain
PfamPF031062.0E-23382437IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MAENESFEAL AVQNKEQKRQ GNEQNDGDFV GEELEGDCNE EEEEEEEKEE KENQLSELQQ  60
IVPNSQKEEE VREEQVETLT VAPQSSTEIL PKENDRYSGL KGNSAAETHV EAEYKEQVGS  120
SHQEVLGNVA DKSSEAQTQN QLQPSLCPTS LSELSPTSVT QPISSAPSPS PAKKISPPEV  180
KNAGITEAGD RSSAGLKALY VPVARTSIPD GYNWRKYGQK QVKSPKGSRS YYKCTYFDCC  240
AKKIECSDHS GHVIEIVNKG MHCHDPPRKN KGTRKSRSGL SVGPILQTTV TEHTVRMLKD  300
SEPDTLSMEL VQETSAISER KRQSSSSSDE SKETQIKEEN IGEPEPKRRL KGNLECSKSV  360
LKPGKKPKFV VHAAGDVGIT GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA  420
VDNTNAVIIT YKGVHDHDMP VPKKRHGPPS APLVAAAAPA AMSNLPIKKT DAVQSQVTST  480
QWSVGKEGEL TGETLDLGGE KEKAIESART LLSIGFEIKP C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-26368440274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1152s0100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3774500.0GQ377450.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 30 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024446055.10.0probable WRKY transcription factor 32 isoform X2
SwissprotP595831e-134WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A2K1WZ370.0A0A2K1WZ37_POPTR; Uncharacterized protein
STRINGPOPTR_0018s11630.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-114WRKY DNA-binding protein 32