PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1292s0030.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 686aa    MW: 74639.9 Da    PI: 6.8534
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1292s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.64.2e-12245290260
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                             +DgynWrKYGqK+            Ct a+C vkkk+e+++ ++++++i+Y+++Hnh+k
  SapurV1A.1292s0030.1.p 245 EDGYNWRKYGQKQ------------CTRANCLVKKKIECAH-EGQITKIIYKDTHNHPK 290
                             7***********6............***************9.***************85 PP
2WRKY103.41.3e-32437495159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k+v+ tYeg+Hnhe
  SapurV1A.1292s0030.1.p 437 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKYVILTYEGKHNHE 495
                             59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.2E-9239291IPR003657WRKY domain
SMARTSM007746.3E-13244290IPR003657WRKY domain
SuperFamilySSF1182908.11E-13244291IPR003657WRKY domain
PROSITE profilePS5081110.074245291IPR003657WRKY domain
PfamPF031067.5E-6245289IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.2E-36422497IPR003657WRKY domain
SuperFamilySSF1182904.84E-28430497IPR003657WRKY domain
PROSITE profilePS5081137.493432497IPR003657WRKY domain
SMARTSM007741.6E-36437496IPR003657WRKY domain
PfamPF031067.8E-25438495IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 686 aa     Download sequence    Send to blast
MDNNPAADYK TLLWVPNLET KSCDGDGGDN NRGISIAERR AAKCGFKMKA ERINAARFRT  60
TSPLTSPLRS PFVIIPSGIS PSALLDSPIM PPNSHVQPSP TSGTFPLSPL KYESESLLRC  120
GDRERGSNAG AGCLSVRFKP LGNSLPLSEN QGDDFDTEAT LMVDPSKGFQ LPVAFSKQAT  180
PDKKCTSDSH TDVNISDVQI GSSDLASNPI CVQRETIHGE NAASRHPVEE HKRTLPATTI  240
GRSSEDGYNW RKYGQKQCTR ANCLVKKKIE CAHEGQITKI IYKDTHNHPK PRPSCGAPPG  300
PASSLDEMQE MDGGGSVQKN TESGFKDIEV QSDWRTDGPE RTSSTSEVTE LSDPTSTTQN  360
KSLETFESTE TPELPSTLAS HDDDGVTQGS LFGADADYES ESKRRKIESC LVETSMASRA  420
AREPRVVVQI ESEMDMLDDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCSV RKHVERASHD  480
LKYVILTYEG KHNHEVPAAR NSSHGKSTGR NLSQTTGNAR LVQALARNSD APNLEALFVE  540
FAPSFDRKPV FKNDYLRSSF PGNFSNEMNL GSSFIYPMRF PPSNHQLAAN HSGSVASFVP  600
DFPGSLSPCL QTAENLSLAR VDFSGDGKPV GQAHTFIQGP PSIRPKPEEQ KGDNLYGASS  660
SMDSLNAASS SLSVYRQLLG SFLQS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-33428498878Probable WRKY transcription factor 4
2lex_A3e-33428498878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1292s0030.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN1179310.0JN117931.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor (WRKY35) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024438829.10.0WRKY transcription factor WRKY24
TrEMBLA0A2K1Y3350.0A0A2K1Y335_POPTR; Uncharacterized protein
STRINGXP_008218446.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.12e-76WRKY DNA-binding protein 2