PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.2062s0030.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 210aa    MW: 22913.5 Da    PI: 8.6654
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.2062s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.17e-212777256
                     AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                            +y+GVr ++ +gr++AeIrdp   gkr r++lg+f+taeeAa+a+++a+++++g+
  SapurV1A.2062s0030.1.p 27 HYRGVRKRP-WGRYAAEIRDP---GKRSRVWLGTFDTAEEAARAYDKAAREYRGA 77
                            69*******.**********9...557**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.0262784IPR001471AP2/ERF domain
CDDcd000185.09E-302784No hitNo description
SuperFamilySSF541711.7E-222785IPR016177DNA-binding domain
PfamPF008472.8E-142776IPR001471AP2/ERF domain
SMARTSM003801.0E-342790IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-322784IPR001471AP2/ERF domain
PRINTSPR003671.2E-112839IPR001471AP2/ERF domain
PRINTSPR003671.2E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MAPRKLNVSD GGSFRKASGD HDKKEIHYRG VRKRPWGRYA AEIRDPGKRS RVWLGTFDTA  60
EEAARAYDKA AREYRGAKAK TNFPFAEGVV NYDDDKQSSS QSSTVESSSS PVASAVVTRQ  120
VGGVGGVVGM GGFPFVYQQQ NVNVVAPVWF FDSVRPEFTT QRFPVRFDQV GLESAGCAQS  180
DSDASTMVDC QPRRTVLDLD LNLPPPLDA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-222485264ATERF1
3gcc_A8e-222485264ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00623PBMTransfer from PK19363.1Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.2062s0030.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006372733.11e-100ethylene-responsive transcription factor 9
TrEMBLU5FHV14e-99U5FHV1_POPTR; Uncharacterized protein
STRINGPOPTR_0017s04540.11e-100(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-28erf domain protein 9