PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.1G019600.1.p
Common NameLOC101782719, SETIT_018161mg
Organism
Setaria italica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 253aa    MW: 26940.2 Da    PI: 6.2559
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.1G019600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-11124171552
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                         kr +r   NR +A+rsR RK+++i eLe+ v +L+ e +aL  ++  l
  Seita.1G019600.1.p 124 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQMEVSALSPRVAFL 171
                         899**********************************99998776555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-13120184IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.634122178IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.83E-11124178No hitNo description
PfamPF001701.4E-9124172IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.4E-12124178No hitNo description
CDDcd147031.64E-22125175No hitNo description
PROSITE patternPS000360127142IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MAQLPPRAPS AAAQDHWSAA GEFLGFAAAR RGAHRRSASD PAAFLEAVPM DDVIAGDDFD  60
RLDDEQLMSM FSDVDAPAVS DGGGGAERAG DAQLMDLGDA EDGMAAASSP ASARAAADGV  120
ADPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQME VSALSPRVAF LDHQRSLLTV  180
GNSHLKQRIA ALAQDKIFKD AHQEALKKEI ERLRQLFHQQ QIKATTGGAD IAAAASMQAR  240
QELLACEGAA IR*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.1G019600.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By white light. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004951321.11e-178basic leucine zipper 19
SwissprotQ6K3R91e-108BZP19_ORYSJ; Basic leucine zipper 19
TrEMBLK3YV651e-177K3YV65_SETIT; Uncharacterized protein
STRINGSi018161m1e-178(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-56bZIP family protein