PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Seita.2G426400.1.p

Common Name

LOC101759545, SETIT_031399mg

Organism

Setaria italica

Taxonomic ID

4555

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria

Family

bZIP

Protein Properties

Length: 150aa MW: 16564.6 Da PI: 4.7369

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Seita.2G426400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21	7.3e-07	23	65	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R ++ e+L +vkeL++ +L +++++lk+ev++ +s+v Seita.2G426400.1.p 23 RHPRLSGFEQLDARVKELTSSQAELLERIQKLKQEVQNWRSNV 65 555666789****************************998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence Send to blast
MAAESTAPPP PSLPPPATAA ALRHPRLSGF EQLDARVKEL TSSQAELLER IQKLKQEVQN 60 WRSNVETQVR TCQNELQGLK KGLDSEVEQL KLEMKEIRSA IQKEKGNLPT QITTLEMSNN 120 DTEQALQTQD KALKVDTDAS MEEQTATQA*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Seita.2G426400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004958637.1	1e-103	uncharacterized protein LOC101759545 isoform X1
TrEMBL	K3ZXR7	1e-102	K3ZXR7_SETIT; Uncharacterized protein
STRING	Si031399m	1e-103	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13116	2	2

Link Out ? help Back to Top
Phytozome	Seita.2G426400.1.p
Entrez Gene	101759545