PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.2G426400.3.p
Common NameLOC101759545, SETIT_031399mg
Organism
Setaria italica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 108aa    MW: 12057.7 Da    PI: 7.3685
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.2G426400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.93.7e-0723652163
                        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                        R  ++   e+L  +vkeL++   +L +++++lk+ev++ +s+v
  Seita.2G426400.3.p 23 RHPRLSGFEQLDARVKELTSSQAELLERIQKLKQEVQNWRSNV 65
                        555666789****************************998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-42366No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MAAESTAPPP PSLPPPATAA ALRHPRLSGF EQLDARVKEL TSSQAELLER IQKLKQEVQN  60
WRSNVETQVR TCQNELQGLK KGLDSEVEQL KLEMKEIRSA IQKEKEQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.2G426400.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9641852e-85EU964185.1 Zea mays clone 276545 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958639.13e-71uncharacterized protein LOC101759545 isoform X2
TrEMBLA0A368Q9967e-70A0A368Q996_SETIT; Uncharacterized protein
STRINGSi031399m8e-70(Setaria italica)