PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.6G030200.1.p
Organism
Setaria italica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 760aa    MW: 80350.6 Da    PI: 7.6996
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.6G030200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.51e-06658716563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r+ +NR++A +  + K + i eLe  ++ Le ++k+L   l+ ++++ a+l++++
  Seita.6G030200.1.p 658 KRAKRMLSNRLSAAKRKAIKDMHIHELECNIEMLEWKRKTLSADLQLMQEKQAELEAHN 716
                         9****************************************************999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.1E-5654718IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-4656714No hitNo description
SuperFamilySSF579597.74E-6658712No hitNo description
CDDcd147033.35E-10659710No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    Send to blast
MAPFRSTDWL PSGTPPRIAF RRQKPSTLSL AFAPWAKTLA DMERTTSCSS TTGISSAIVK  60
QADGSNIFHQ RAHGVNPFSV SPQLPWWSHS GDATLTAPHR NLVEKPCQRG HAQSFLPPPS  120
LFPPPSGLIS GPGSGSRSAV VGDSSPSIHG HATSQSLPSS FFLVLGTVDL QAPVANPFPV  180
THDGQPLQGL APPLSSSLIS APSSGVRSAG VGYRSHYIHG HVAKSQSLPS SFFPELGTAD  240
LQVSAATSFP AALGGQLWQG MAPPPSGGLF SYGSRSGSAA VGDISLSLHG HATTSQSLPS  300
SFSCTLGMVD LQPPAATPFP ASLGDLPWQG LAPQPSWTDL GLPACPSQRG AFSGSSTGQS  360
ASFEQIAEWP QSEMSFFSPA AVSGPPLPSS NDNCVGFTRP SSNYELPPLP PSLRIPPLEE  420
ASTYSMLSTT GGTMPWHYAD SSMGAGSSIP AVPNLTAGAM KMKAPMPPLE EASTYSSMGA  480
GSSIPAVPNL TARAMKMKAP MPPSSSQGVG AGSNNFVGFA AQPSLNSELA TLRAGLQAHL  540
LPVKQEPISN KEDELDQDTI QHSMPDNSTA RGLVSWEAAL KMPVESRYNG SSTKVAGSTP  600
CHNSNSTLKL SQPLPPSSLR AGASSSQSHV AGVIFTDAEK EIIRKDRSLQ ELVNTDPKRA  660
KRMLSNRLSA AKRKAIKDMH IHELECNIEM LEWKRKTLSA DLQLMQEKQA ELEAHNKEIC  720
MMVQELEQQA MLKDAVTETQ QAQIQNLNNI IKFNMQRNN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.6G030200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004972618.20.0uncharacterized protein LOC101761403 isoform X2
TrEMBLA0A368RHI20.0A0A368RHI2_SETIT; Uncharacterized protein
STRINGSi013320m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2465522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21230.15e-18bZIP family protein