PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.6G210400.1.p
Common NameSETIT_014894mg
Organism
Setaria italica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family ERF
Protein Properties Length: 251aa    MW: 27178.3 Da    PI: 10.7764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.6G210400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.48.7e-0977121553
                 AP2   5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                         GVr  + +g ++AeIr ps+   rkr+++g+f  a +Aa a+ aa+  +
  Seita.6G210400.1.p  77 GVR-ERLWGGYAAEIRIPSS---RKRIWIGRFQHAMQAALAYAAAMFLF 121
                         998.777**********965...4**********889999999988655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.85774135IPR001471AP2/ERF domain
SMARTSM003802.5E-1174141IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-1175127IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.8E-1676135IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MMESNVLFQK MTSLQLQVTC GSHGVLGGER QAGSSGAARK VRTRRPSVAR ARPAAAAAVA  60
APAAGGARIH RDMGWVGVRE RLWGGYAAEI RIPSSRKRIW IGRFQHAMQA ALAYAAAMFL  120
FYGRNLPKLR RYNFPAGPRP NFSEFVRRAL TVANVKAIAE DHARRFWRFV PLPPPVIPAP  180
PAAPAPPLQV VEAGAGVGAT TTTVDGRGND EIYIDVEILT AADCQFSGAP DEDFVKLIRE  240
MDKDLVFSEI *
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.6G210400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012702333.12e-92ethylene-responsive transcription factor ERF015
TrEMBLA0A368RNV90.0A0A368RNV9_SETIT; Uncharacterized protein
STRINGSi014894m1e-171(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.11e-08ERF family protein