PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Seita.7G299100.1.p
Common NameLOC101757132, SETIT_012481mg
Organism
Setaria italica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 173aa    MW: 18380.6 Da    PI: 10.4546
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Seita.7G299100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.72.9e-09122169148
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         eke kr rr   NRe+Ar   +R++a  +eL++kv+ L++eN++ kk 
  Seita.7G299100.1.p 122 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSENETIKKV 169
                         89****************************************999864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-6119168No hitNo description
PfamPF001701.1E-7122168IPR004827Basic-leucine zipper domain
SMARTSM003380.0086122171IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.668124168IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-5126169No hitNo description
CDDcd147027.61E-9127168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MSDDQQQHSG GQRQCRRGIT PDVELGAALA LADMAGSSVA QAKAARPAVQ QLRTAAAEEA  60
MTDDEEMAST RLSLQLGMVG IQSSSCSSGS SAGRPSRQLA PAPAAATGTH GPRPRHTLTE  120
AEKEAKRLRR VLANRESARQ TILRRQAIRD ELARKVADLS SENETIKKVN QI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSeita.7G299100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004978331.11e-116G-box-binding factor 1
TrEMBLA0A368S1D61e-118A0A368S1D6_SETIT; Uncharacterized protein
STRINGSi012481m1e-115(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-10bZIP family protein