PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.4G217500.1.p
Organism
Setaria viridis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 179aa    MW: 18407.3 Da    PI: 10.3952
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.4G217500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.8e-0982131554
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                         +r+rr ++NRe+Arr R+R++ +++ L  +v+eL a N +L+ el++   
  Sevir.4G217500.1.p  82 RRARRQASNRESARRARARRRGQLDDLSSRVAELRAANARLAVELNRVAA 131
                         69*******************************************99765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.008377156IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-779128No hitNo description
PROSITE profilePS5021710.35880129IPR004827Basic-leucine zipper domain
PfamPF001703.0E-782129IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.49E-682128No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MQRDMATLAR HPLGAADFAS FYLLPHGYSG GGGGDGLWCS YSCHGAGAGG GSVSSVGVGT  60
GEVEPQAAGG AAVAAAARDG ERRARRQASN RESARRARAR RRGQLDDLSS RVAELRAANA  120
RLAVELNRVA AARARAAREG ARLREEARAL RERLDAAEAA KKAKEAGDEG EAGTPPTD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSevir.4G217500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004967159.21e-114bZIP transcription factor 44-like
TrEMBLA0A368QWG72e-54A0A368QWG7_SETIT; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17736811