PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.6G028300.1.p
Organism
Setaria viridis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 760aa    MW: 80148.6 Da    PI: 7.6879
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.6G028300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.45.5e-07658716563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         kr++r+ +NR++A +  + K + i eLe  ++ Le ++k+L   l+ +++  a+l++++
  Sevir.6G028300.1.p 658 KRAKRMLSNRLSAAKRKAIKDMHIHELECNIEMLEWKRKTLSADLQLMQEIQAELEAHN 716
                         9*********************************************9999999999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-4654718IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.99E-6658712No hitNo description
CDDcd147037.49E-10659706No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    Send to blast
MAPFRSADWL PSGAPPRIAF RRQKPSTLSL AFAPWAKTLA DMERTTSCSS TTGISSAIVK  60
QADGSKIFHQ RAHGVNPFSV SPQLPWWSHS GDATLTAPHR NMVEKPCQRG HAQSFLSPPS  120
LFPPPSGLIS GPGSGSGLAV VGDSSPSING HATSQSLPSS FFPVLGTVDL QAPVANPFPV  180
THDGQPLQGL APPLSSSLIS APSSGVRSAG VGYRSHYIHG HVAKSQSLPS SFFPELGMAD  240
LQVSAATSFP AALGGQLWQG MAPPPSGGLF SYGSRSGSAA VGDISLSVHG HATTSQSLPS  300
SFSCTLGMVD LQPPAATPFP ASLGDLPWQG LAPQPSWTDL ALPACPSQRG AFSGSSTGQS  360
ASFEQIAEWP QSEMSFFSPA AVSGPPLPSS NDNCVGFTRP SSNYELPPLP PSLRIPPLEE  420
ASTYSMLSTT GGTMPWHYAD SSMGAGSSIP AVPNLTAGAM KMKAPMPPLE EASTYSSMGA  480
GSSIPAVPNL TARAMKMKAP MPPPSSQGVG AGSNNFVGFA AQPSLNSELA ALRAGLQAHL  540
LPVKQEPISN KEDELDQDTI QHSMPDNSTA RGLVSWEAAL KMPVESRYNG SSTKVAGSTP  600
CHNSNSTLKL SQPLPPSSLR AGASSSQSHV AGVIFTDAEK EIIRKDRSLQ ELVNTDPKRA  660
KRMLSNRLSA AKRKAIKDMH IHELECNIEM LEWKRKTLSA DLQLMQEIQA ELEAHNKEIC  720
MMVQELEQQA MLKDAVTETQ QAQIQNLNSI IKLNMQRNK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSevir.6G028300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004972618.20.0uncharacterized protein LOC101761403 isoform X2
TrEMBLA0A368RHI20.0A0A368RHI2_SETIT; Uncharacterized protein
STRINGSi013320m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2465522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21230.11e-19bZIP family protein