PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00097.1_g00020.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 347aa    MW: 38099.9 Da    PI: 9.4969
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00097.1_g00020.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.45e-16277322551
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                              +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++Lk + +e
  Sme2.5_00097.1_g00020.1 277 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLK-RQKE 322
                              79**************************************99.4444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR000411.0E-5121143IPR001630cAMP response element binding (CREB) protein
Gene3DG3DSA:1.20.5.1708.4E-16268320No hitNo description
PRINTSPR000411.0E-5272288IPR001630cAMP response element binding (CREB) protein
SMARTSM003381.8E-14273345IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.634275320IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10277322No hitNo description
CDDcd147074.50E-24277322No hitNo description
PfamPF001708.6E-13277320IPR004827Basic-leucine zipper domain
PROSITE patternPS000360280295IPR004827Basic-leucine zipper domain
PRINTSPR000411.0E-5290310IPR001630cAMP response element binding (CREB) protein
PRINTSPR000411.0E-5310327IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MGSQGGGGGG GGNSIGAAQA QAQAQDPKPN ALARQGSLYS LTLDEVQNQL GDLGKPLSSM  60
NLDELLKTVW TVEAGQGMGG ADYGVLQHGQ VASGSSLHRQ SSIALSSDLS KKTVDQVWQD  120
IQQGHKRDSI DRRARERQPT LGEMTLEDFL VKAGVVAEST PEKKSLGSVL GVESMALPQQ  180
SVQQQAQWSQ YQIQAMHQLL PQQHQQPQQQ NMLPVFMPGH SIPQPLNIVA NPTIDAAYPE  240
SQMTMSPTAL LGTLSDTQTL GRKRVAPDDV VEKTVERRQK RMIKNRESAA RSRARKQAYT  300
HELENKVSRL EEENERLKRQ KEIEKVLPSV PLPEPKYQLR RTSSASF
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754490.0HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016555059.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES33e-99AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A1U8FFG20.0A0A1U8FFG2_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A2G2YNE70.0A0A2G2YNE7_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRINGSolyc10g081350.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33342448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.15e-96ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]