PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sme2.5_00121.1_g00011.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

bZIP

Protein Properties

Length: 808aa MW: 93249 Da PI: 9.0198

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_00121.1_g00011.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.7	1.5e-14	141	185	4	48
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++r rrk+kNRe+A rsR+RK+a+ eL +kv Le+eN++Lkke Sme2.5_00121.1_g00011.1 141 DRRLRRKIKNRESAARSRARKQAYHNELVNKVSHLEEENMKLKKE 185 6899***************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.2E-12	138	185	No hit	No description
SMART	SM00338	5.4E-12	138	202	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.76	140	185	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.25E-17	142	184	No hit	No description
SuperFamily	SSF57959	1.25E-10	142	185	No hit	No description
Pfam	PF00170	5.7E-12	142	185	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	145	160	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence Send to blast
MNWDSDHEFS WEWATISFIV DRQNSWFNLT FDEVENRLDF IRSSGGNIDD TSTATTFQHR 60 ARLTLARERE PTLGETTLED YLVKAGLFVA DASLEHTMSL DNPMAMQNYV PPMGLSPSPS 120 LSDTPVSGRK RDATGIDKTI DRRLRRKIKN RESAARSRAR KQAYHNELVN KVSHLEEENM 180 KLKKEKCYQI VPLTSCKYLK KECIAFPVKS EVNAISTYKD TASGISGVLF HVPRPFPPAS 240 DCIIVHWINA FEIFLWQKLV FAFDPKGSLL GRECFTPLVD LPGTTRISQA SGFRILSFLD 300 VLLFGLMELE KMLSELSFDD SNLLALGPDG GLRSCRRLGS RARGCDGKRG IDVLQLRVGS 360 WNIGTLTGGS RDRNGVGILV DEDLREYAVE VRRTSDRIMF IKLVVGSQRE NHLITFRSMV 420 AKTQIDYLLI RKEDRSLYKD YKVIPCENIS IQHRLLVMDL EIRRKKKKKV IFAQPKIRWG 480 GLTPALSREM VDNFGSLGAW RSSGDVNSMW DTTTRFIRKV ATDVLGVSRR IFGGRQGDWW 540 WNGEVENKVK AKKVAYTEWL DCRELSDKGG DKRLYRLAKV RERKARDLDQ VKCIKDAEGE 600 VLVDETSIKL RWQGYFHKLL NEKTDRDVEL GELAHSESHR GFGYSRRFRV EEDGIEWLTR 660 LFNAIIKNAK MPDEWRRSTM VSLYKNKGDI QNCNNYRGIK LLSHAMKVWE RVVEMRRLME 720 KYRERKNNLH MMFIDLEKAY DKVQRDVLGD ELTWSTQEEV PWCMLFADDI VLIDETQAKV 780 NDILKVWRQA LECIIFADDI VLIAETGT

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence Send to blast

MNWDSDHEFS WEWATISFIV DRQNSWFNLT FDEVENRLDF IRSSGGNIDD TSTATTFQHR  60
ARLTLARERE PTLGETTLED YLVKAGLFVA DASLEHTMSL DNPMAMQNYV PPMGLSPSPS  120
LSDTPVSGRK RDATGIDKTI DRRLRRKIKN RESAARSRAR KQAYHNELVN KVSHLEEENM  180
KLKKEKCYQI VPLTSCKYLK KECIAFPVKS EVNAISTYKD TASGISGVLF HVPRPFPPAS  240
DCIIVHWINA FEIFLWQKLV FAFDPKGSLL GRECFTPLVD LPGTTRISQA SGFRILSFLD  300
VLLFGLMELE KMLSELSFDD SNLLALGPDG GLRSCRRLGS RARGCDGKRG IDVLQLRVGS  360
WNIGTLTGGS RDRNGVGILV DEDLREYAVE VRRTSDRIMF IKLVVGSQRE NHLITFRSMV  420
AKTQIDYLLI RKEDRSLYKD YKVIPCENIS IQHRLLVMDL EIRRKKKKKV IFAQPKIRWG  480
GLTPALSREM VDNFGSLGAW RSSGDVNSMW DTTTRFIRKV ATDVLGVSRR IFGGRQGDWW  540
WNGEVENKVK AKKVAYTEWL DCRELSDKGG DKRLYRLAKV RERKARDLDQ VKCIKDAEGE  600
VLVDETSIKL RWQGYFHKLL NEKTDRDVEL GELAHSESHR GFGYSRRFRV EEDGIEWLTR  660
LFNAIIKNAK MPDEWRRSTM VSLYKNKGDI QNCNNYRGIK LLSHAMKVWE RVVEMRRLME  720
KYRERKNNLH MMFIDLEKAY DKVQRDVLGD ELTWSTQEEV PWCMLFADDI VLIDETQAKV  780
NDILKVWRQA LECIIFADDI VLIAETGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	462	468	RRKKKKK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975440	1e-101	HG975440.1 Solanum pennellii chromosome ch01, complete genome.

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-15	ABA-responsive element binding protein 3