PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00158.1_g00005.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 287aa    MW: 32119.4 Da    PI: 9.6386
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00158.1_g00005.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.63e-09341846
                             HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                             rr+ +NReAAr+sR+RKka++++Le    +L++  ++L+
  Sme2.5_00158.1_g00005.1  3 RRLSQNREAARKSRLRKKAYVQQLESSRMKLTQLEQQLQ 41
                             89***********************99988888887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.921142IPR004827Basic-leucine zipper domain
SMARTSM003380.0063159IPR004827Basic-leucine zipper domain
PROSITE patternPS000360318IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.5E-7343No hitNo description
PfamPF077161.0E-6342IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.5E-8345No hitNo description
PfamPF141442.7E-3183157IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MLRRLSQNRE AARKSRLRKK AYVQQLESSR MKLTQLEQQL QRARQQGVYI SSSGDQSQSM  60
SGNGALAFDV EYARWLEEHN RRINELRGAV SSHAGDGELR IIVDGILAHY DDLFRIKGDA  120
AKADVFHVLS GMWKTPAERC FLWLGGFRSS ELLKLLINQL EPLTEQQSLA ISNLQQSSQH  180
AEDALSQGID SLQQSLAETL AGSLAPSGSS GDVANYMGQM AMAMGKLGTL EGFIRQADSL  240
RQQMLQQLHL ILTTRQSARA LLSINDYFSR LRALSSLWLA RPRESNE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027078869.10.0transcription factor TGA2.2-like isoform X2
RefseqXP_027161661.10.0transcription factor TGA2.2-like
SwissprotO241601e-166TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A068UNV80.0A0A068UNV8_COFCA; Uncharacterized protein
STRINGSolyc01g008730.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-131bZIP family protein