PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00236.1_g00021.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family C2H2
Protein Properties Length: 157aa    MW: 18422.1 Da    PI: 10.077
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00236.1_g00021.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.00049115130217
                              EETTTTEEESSHHHHH CS
                  zf-C2H2   2 kCpdCgksFsrksnLk 17 
                               Cp Cgk F  ksnL 
  Sme2.5_00236.1_g00021.1 115 MCPSCGKKFDPKSNLS 130
                              6*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MNVEEWRFDV AAMAKQIFLK KFLDFLPWNP HSFKESDDNK IQESCTKIQE HAFMQHYRIT  60
DISSWDNLPA SRSVIRGDYD SRIGARADSK VEKKKCPRCS RWCKYYATKS TSIIMCPSCG  120
KKFDPKSNLS SSGRNLAVRS SLYRKKQDHQ RLFLEVR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM1E1714e-54M1E171_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000976927e-55(Solanum tuberosum)