PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00287.1_g00001.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 448aa    MW: 48309.6 Da    PI: 7.03
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00287.1_g00001.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.6e-16243299359
                              XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                              + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  +++++ + 
  Sme2.5_00287.1_g00001.1 243 DTKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEA 299
                              679*****************************************9999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-19241305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.679243298IPR004827Basic-leucine zipper domain
PfamPF001701.4E-13244297IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11245295No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-12245297No hitNo description
CDDcd147022.95E-6246297No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
PfamPF124986.4E-48312437IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MDRVFSVDDD IGDHFWSTPP TAELGVDSPT SAAAMSYSKM MNRSSSEWAF QRFLQEAAGA  60
GTTTSSPPQP PTMASSSSSS HQNDVVEIKD ENLSTPNLNS STALNMKPAT LFGSAPPQNI  120
PVDAEEYQTF LKSRLDLACA AVALTRAKNL RLQDSSSTVP DKGPETGSAS QSVSHIFKGS  180
GQEVRKVQDK DSGGPVGIPS LPTVQKKAGV QVKSTTSGSS RDQSDDDEAE GEAETTQGMD  240
PADTKRVRRM LSNRESARRS RRRKQAHLTE LETQVSQLRV ENSSLLKRLT DISQKYNEAA  300
VDNRVLKANV ETLRAKVKMA EETVKRVTGL NPLFQAMSEM SSMAMPSFSG SPSDTSADAA  360
VPVQDDPKHH YYQQPPNNHM PTHDPIIQNG IVDVPPIGNG QQNPATAAAV GNKMGRTSSM  420
QRVASLEHLQ KRIRGKVSSC GTQGQGEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257264RRSRRRKQ
2259264SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015062354.10.0light-inducible protein CPRF2
SwissprotQ990901e-147CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLM1BPR90.0M1BPR9_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000500960.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.25e-66bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]